Panthera leo (lion): 122216503
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Entry
122216503 CDS
T10741
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
plez Panthera leo (lion)
Pathway
plez04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122216503 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plez04121
]
122216503 (TRIM54)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122216503 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
DUF349
Sina_RING
UvrD_C
PHP
MIF4G_like_2
Zn_ribbon_FGT1_2
DUF1421
FUSC
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122216503
NCBI-ProteinID:
XP_042789356
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All DBs
Position
A3:complement(118102282..118126483)
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLTQRFEALCAVLEERKAELLQALAREQE
QKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGTMSKVELAG
RPEPGYESMDQFTVSVEHVAEMLRTIDFQAGASGEEEDEEVALEGEEGSAGPEEERPDGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctgtggcaatcccggggctccaccactgtgtcttccggaggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtctatggcctgcagcgaaacctacta
gtggagaacattatcgacatttataaacaagagtcttcccgaccactgcactccaaggct
gagcagcaccttatgtgcgaggagcatgaagaggagaagatcaatatctattgcctgagc
tgtgaagtgcccacctgctctctctgtaaggtcttcggtgcccacaaggactgtgaggtg
gcccccctgcccaccatttacaaacgccagaagagtgagctcagcgatggaatcgcaatg
ctggtggccggcaacgaccgcgtgcaggcagtgatcacacagatggaggaggtgtgccag
accatagaggacaacagccggcgccagaagcagttactaacccagaggttcgaggccctg
tgcgcggtgctggaagagcgcaaggctgagttgctgcaggcgctggcccgcgagcaggag
cagaagctgcagcgcgtgcggggcctcatccgccagtacggagaccacctggaggcctcc
tctaagctcgtggagtcggccatccagtccatggaggagccacagatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcgggacaatgtcgaaagtggagctggcagga
cggccagagccgggctatgaaagcatggatcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccaggcgggcgcttctggggaggaagaggatgaggag
gtggcgttggagggggaagagggcagcgcggggccagaggaagagcggccggatgggccg
gaaggcaccggcgggcactga
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