Panthera leo (lion): 122216637
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Entry
122216637 CDS
T10741
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
plez Panthera leo (lion)
Pathway
plez03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122216637 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plez03021
]
122216637 (CPSF3)
03019 Messenger RNA biogenesis [BR:
plez03019
]
122216637 (CPSF3)
Transcription machinery [BR:
plez03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122216637 (CPSF3)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122216637 (CPSF3)
U7-dependent histone pre-mRNA processing factors
122216637 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
122216637
NCBI-ProteinID:
XP_042789646
UniProt:
A0A8C8WHT4
LinkDB
All DBs
Position
A3:complement(133027457..133066552)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEGSE
EDESLREMVELAAHRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgcgggatccaccctggcctggaaggaatggacgcgcttccttatattgatttaatcgac
cccgctgagattgatctcctgttaattagtcatttccatctggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaaggacatttatgactcacgctacaaaa
gctatttatagatggcttctctcagattatgtcaaagttagtaacatatcagcagacgac
atgctgtacacggagacagatttggaagagagcatggacaaaatcgaaaccatcaacttt
catgaagttaaagaagttgcaggaatcaagttttggtgttaccatgcaggccacgttcta
ggagctgccatgttcatgattgagatcgcgggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggcagctgaaattccgaatattaaacctgacatt
ctcattattgaatctacgtatgggacgcacatccatgagaagcgtgaagagagagaagca
agattctgtaacactgttcatgacattgtaaacagagggggcagaggcctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgatcttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactacgcgtcgtctttggccaagaagtgcatggca
gtgtaccagacgtacgtaaatgccatgaacgacaaaatccgcaaacagatcaacatcaac
aatccctttgtgttcaagcacatcagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgtcgtcatggcctccccgggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgcacggataagaggaacggcgtcattatagcagggtactgtgtagaa
gggacacttgccaagcatatcatgtctgaaccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccaa
caaaccagtgaatttatccgtgctttgaaaccgcctcatgtgattttagtccatggagaa
caaaatgaaatggccagattgaaagcagccctgattcgagaatatgaagataacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccgtatact
ggtccttttaatttgctctattaccagctacagaagttgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggttagcaaacccttccaacgatatgtatgcggatacagta
acaaccgtgatcctggaagttcagtcaaacccgaaaatcaggaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttacagcaaaaggttggagatcatgctccaggac
atatttggagaagactgtgtaagtgtaaaagacggttccattctcagtgtcacagtggat
ggaaaaactgctaatataaacctggagacacggacggtcgaatgtgaggaaggaagcgag
gaggatgagtccctccgggagatggtggagctggccgcgcacagactctacgaggccctc
acgccagttcactga
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