Panthera leo (lion): 122217042
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Entry
122217042 CDS
T10741
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
plez Panthera leo (lion)
Pathway
plez04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122217042 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
plez00536
]
122217042 (COL25A1)
Glycosaminoglycan binding proteins [BR:
plez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122217042 (COL25A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
122217042
NCBI-ProteinID:
XP_042789879
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Position
B1:113494856..113955173
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AA seq
620 aa
AA seq
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MLVKKHAGKGGGREPGSEDPRQRCAWTVPPCTSLAALLSVVALMSCLYLGVKTNDLQARI
AALESAKGDPSIHLLPDRLDQLKAVVQEKVEQLLAQRSYEHMAKIRIAREAPSECNCPAG
PPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQILTV
KGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGESGKPGEQGLMGPLGPPGQKGS
VGMPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDRGEKGDAGESGPKGDTGEKGDPGS
SAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGERGEA
GPPGRGERGEPGAPGPKGDRGEKGDSGALGPRGPPGQKGDQGATEIIDYNGNLHEALQGP
PGPPGPQGLQGPKGEPGSPGIPGVDGEQGLKGSKGDMGDPGMPGEKGGIGLPGLPGANGM
KGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGLKGEPGQK
GDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGFP
GPRGEKGDVGEKGEKVTSPF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcatgcggggaaaggtgggggccgggagccaggctccgaggacccg
aggcagcgttgtgcctggaccgtgccgccgtgcacctccctggcggcccttctctcagtg
gtggccctgatgtcttgtctgtaccttggggtgaaaaccaacgacctccaggcgaggatc
gctgctctcgaatccgcaaaaggggacccttccatccatctgctccctgatcgcctggat
cagctcaaagcagtggtgcaagagaaagtggagcaacttctggctcagagatcctatgaa
catatggctaaaataagaatcgcaagagaagcaccttcagagtgcaactgcccagcaggc
cctccggggaaacgaggtaagaggggccgaagaggagaatctggtcctcctggccaacct
ggtcctcagggccctcctggtccaaaaggtgataagggagaacaaggtgaccagggacct
cggggtctgccaggcttccccacagttgctgctctgcacagtaatcagatcctcaccgtc
aagggtgaccaagggcaggctgggcctccaggacctccaggccctcccggcccaagaggg
cctcctggggacacagggaaagatggccctcgtggaatgccaggagtgcctggtgaatca
gggaaaccaggagaacaaggcttgatgggtcctctggggcctccaggacaaaagggttct
gttggaatgcctggaattccaggggtgaatggtcaaaagggtgagcctgggttgcctgga
acagtaggacaaaacggaataccagggccaaagggagaacccggagatcgaggagaaaag
ggagatgctggagagagtggccccaaaggtgacacaggcgaaaagggtgaccctggatca
tctgcggcaggaattaagggggaacctggagaatctggtcgtccagggcaaaagggtgaa
ccagggcttcctgggcttcctggacttccggggataaagggagaaccaggtttcattggt
cctcaaggagaaccaggcttaccagggttaccaggaacaaagggtgaacgtggggaggca
gggcctcctggaagaggtgagcgaggggagcctggagcccctggaccaaagggtgatcgt
ggagagaaaggggactctggagccctgggaccaaggggtccacctggtcaaaagggagat
caaggagccactgagatcatagactacaatggcaacctccacgaagccttgcagggtccc
cctggaccacctggacctcaaggactacaaggaccaaagggagagccaggatctccagga
atcccaggagttgatggagagcagggacttaaaggctcaaagggagacatgggggaccca
ggtatgccaggtgaaaaaggaggaatcggacttcctggattaccgggtgccaatggaatg
aaaggagaaaaaggagactctggattaccaggtcctcagggtccttccatcataggccca
ccaggcccaccaggcccccatggcccaccaggccccatgggacctcatggacttcctgga
ccaaagggtgaaccagggttaaatggtgttaaaggattgaagggtgaaccaggtcaaaag
ggtgacagaggaccccttggtcttccaggagcatctggcttagacgggaagccaggatcc
cggggtacagatggccctatgggaccccatggccctgcaggtcccaaaggagaaagaggt
gaaaaaggagctatgggagagcctggacccagaggaccctatggtctgcctggcttccct
ggtccacgaggcgagaagggtgatgtaggagaaaagggggaaaaggtgacctctccattc
tag
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