KEGG   Panthera leo (lion): 122217593
Entry
122217593         CDS       T10741                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
plez  Panthera leo (lion)
Pathway
plez03440  Homologous recombination
plez03450  Non-homologous end-joining
plez04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:plez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122217593 (RAD50)
   03450 Non-homologous end-joining
    122217593 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    122217593 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plez03032]
    122217593 (RAD50)
   03400 DNA repair and recombination proteins [BR:plez03400]
    122217593 (RAD50)
DNA replication proteins [BR:plez03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    122217593 (RAD50)
DNA repair and recombination proteins [BR:plez03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     122217593 (RAD50)
    BRCA1-C complex
     122217593 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     122217593 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N AAA_15 AAA_29 DUF2703 Intein_splicing
Other DBs
NCBI-GeneID: 122217593
NCBI-ProteinID: XP_042790702
LinkDB
Position
A1:109412549..109506000
AA seq 1312 aa
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLISSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEKETEIANQMMNDFAE
KETMKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAEHELSKAEKNSNVEALKTEVISLQSEKADLDRTLRKLDQEMEQINHHTTTRTQMEM
LTKDKSDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHLNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLGRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNASNKIAQDKTNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVTCSVSSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggattgaaaagatgagcattctgggtgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagaacttatagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacgctgcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaacaaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaatatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccactgaagaatcgtctaaaagaaattgaacaa
aatctttctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
cagatggaaaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtgagggagaaagaaagg
agactgatagactgtcagcgtgaactggaaaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaacatatccgagctagagattcattaattcagtctttagcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagagacaagagaaggaaacagaaattgccaaccaaatgatgaatgactttgcagaa
aaagagactatgaaacaaaaacagattgatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacatgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagccttcaaagtgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaagagatggaacagataaaccatcatacgacaacacgtacccagatggagatg
ctgaccaaagacaaatctgacaaagatgaacaaatcagaaagataaaatctcgacacagt
gatgaattaacttcattgttagggtattttcccaacaaaaagcagcttgaagactggctt
catagtaagtcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatttaaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaggaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacggcagtttactcccagttcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttacagtctaagctgcggcttgctccagataaactcaagtcaacagaatcggaactaaag
aaaaaagaaaaacggcgtgatgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcaaaatgtcaacagagac
atacagcgcttaaagaatgacatagaagaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtatgcctgacagatgttacaattatggaaagattccagatg
gaacttaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttgggtagaactgtccagcaagtaaaccaggagaaacaagaaaaacaacacaagttagat
acagtttccagcaagattgaattgaatcgtaagcttatacaggaccagcaagaacagatt
caacacttaaagagtacaacaaatgaactgaagtcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaactggaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacattggag
aagttccagcaggaaaaagaagaattaatcaataaaaaaaatgcaagcaacaaaatagca
caggataaaacgaatgatatcaaagagaaagttaaaaatattcatggttatatgaaggac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtgatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagag
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctacaagat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggtcttacaaatgaaaaatgaacatcagaaattg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattatacattttaagagagaacttcgagaacctcaatttcgggatgcg
gaggaaaagtacagggaaatgatgattgtcatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacagaaggtattagcctcactcatcattcgtctggccctggctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgacagagaa
aatattgaatctcttgcacatgctctcgttgagataataaagagtcgctcgcagcagcgt
aacttccagcttctggtaatcactcacgatgaggattttgtggagctcttagggcgttct
aaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
acatgtagtgttagctctctaggttcttatgttcattaa

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