Panthera leo (lion): 122218133
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Entry
122218133 CDS
T10741
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
plez Panthera leo (lion)
Pathway
plez03013
Nucleocytoplasmic transport
plez05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122218133 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122218133 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plez03019
]
122218133 (NUP54)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122218133 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
122218133
NCBI-ProteinID:
XP_042792092
UniProt:
A0A8C8WDW2
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All DBs
Position
B1:143313038..143367568
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AA seq
508 aa
AA seq
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MAFNFGAPSGTSGTAAATAAPAVGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKG
FGFGTGFGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLIN
TASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYS
CMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTE
VVIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQN
PPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIS
ELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQC
ELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLIS
IIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcggttgggtttggaggatttgggacaacatctacaacagctggttctgcattcagc
ttttctgctccagctaacacaggcactactggactcttcggtggtactcagaacaaaggg
tttggatttggtactggttttggcacaacaactggaagtagtactggtttaggtactggt
ttgggaactggactgggatttggaggatttaatacacagcagcagcaacagcaaactaca
ttaggtggtctcttcagtcagcctacacaagctcctacccagtccaaccaactgataaat
actgcaagtgctctttctgctccaacactgttgggagatgagagggatgctattttggca
aaatggaatcagctgcaggccttttggggaacaggaaaaggatatttcaacaacaacatt
ccaccagtggaattcacacaagaaaatcccttttgccgatttaaggcagtaggttatagt
tgtatgcccaataataaagacgaagatgggctagtggttttagttttcaacaaaaaagaa
acagatattcgaagccagcaacagcagttggtagaatcattgcataaagttttgggagga
aaccagacccttactgtaaatgtagagggtattaaaacactgccagatgatcagacggaa
gttgtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagctaca
acactatatgcccattttgaacaaactaatataaaaacacagttgcagcaacttggtgta
accctttctatgactagaacagaactttctccagcacagatcaaacaacttttacagaat
cctcctgctggtgttgatcctattatttgggaacaagccaaggtagataatcctgattct
gaaaagttaattccggtacccatggtgggtttcaaagaacttcttcgaagactgaaggtt
caagatcagatgactaagcaacatcagaccagattagatatcatatctgaagatattagc
gaattacagaagaatcaaaccacaactatggccaaaattgcacaatacaagaggaaactc
atggacctttcccacagaactttacaggtcctaatcaaacaggaaattcagaggaagagt
gggtatgccattcaagctgatgaagagcagttgcgagttcagctagatacaattcagtgt
gaactgaatgcacctacccagtttaagggccgactaaatgaactgatgtcccaaatcagg
atgcagaatcattttggagcagtcaaatctgaggaaagatattacatagatgcagatctg
ttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccatttgattagc
atcataaaagatgacctagaagatataaagttggtagaacatggattgaatgaaaccatc
cacatcagaggtggtgtctttagttga
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