Panthera leo (lion): 122219545
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Entry
122219545 CDS
T10741
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
plez Panthera leo (lion)
Pathway
plez03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122219545 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plez01009
]
122219545 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plez04515
]
122219545 (PCDH1)
Protein phosphatases and associated proteins [BR:
plez01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122219545 (PCDH1)
Cell adhesion molecules [BR:
plez04515
]
Cadherins
Protocadherins
122219545 (PCDH1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122219545
NCBI-ProteinID:
XP_042793799
UniProt:
A0A8C8W9I4
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All DBs
Position
A1:complement(117633617..117659561)
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AA seq
1237 aa
AA seq
DB search
MDSRAGGRRCPEAALLIPEPARMGPLRPSPGPGGQRLLLPPLLLTLLLLLAASPGHATRV
VYKVLEEQPPNTLIGSLAADYGFPDMGHLYKLEVGSPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN
TNIGSLFPIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQAPEVVKRLLRLDRNTGLITVQGPVDREDVSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVTEVTASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSSKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagggccggcggccggcggtgccccgaggcggccctcctgattccagagcct
gccaggatggggcccctgaggcctagcccaggccctggggggcaacggttgctgctgcct
cccttgttactgacactgctgcttctgctggccgcgtccccaggccatgccactcgggtg
gtgtacaaggtgctggaggaacagccacccaacaccctcattgggagcctcgcagctgac
tacggttttccagatatgggccacctgtacaaactagaggtaggctccccgtacctgcgg
gtggatggcaagacgggagacatcttcaccacggagacctctatcgaccgcgaggggctc
cgtgaatgccagaaccagctccccggtgagccctgcatcctggagtttgaggtgtctatt
acagacctcgtgcagaatggcagtccccggctgttagagggccagatagaggtacaggac
atcaatgacaacacgcccaacttcgcctcgccagtcatcacgttacccatccctgagaac
accaacatcggctcactcttccccatcccggtggcttctgaccgtgatgctggccccaac
ggtgtggcgtcctatgagctgcaggccgggcccgaggcccaggagctatttgggcttcag
gtggcagaggaccaggaggggaagcagccacagctcatcgtgatgggcaacctggaccgg
gagcgctgggattcctatgacctcaccatcaaggtgcaggatggtggcagccccccacgt
gccagcagtgccctgcttcgagtcactgtgcttgacaccaatgacaacgcccccaagttc
gagcggccctcctatgaggctgagctgtctgagaacagccccataggccactcagtcatc
caggtgaaagccaatgactcggaccaaggtgccaatgcggagattgactacacattccac
caggcgcctgaagtggtgaagcgtcttctgcgactggacaggaacactggacttattact
gtgcagggccccgtggatcgtgaagatgtaagtaccctgcgcttctcagtgctcgccaag
gaccgaggcaccaaccccaagagtgcccgcgcccaagtggtggtgactgtgaaggacatg
aacgacaatgcccccaccattgagatccggggcatagggttggtgacccatcaagacggg
atggcgaacatctcagaagatgtggcagaggagacagctgtagccctggtacaggtatct
gaccgagatgagggagagaatgcagctgtcacctgtgtggtggcaggtgacgtgcccttc
cagctacgccaggccagtgagactggaagtgacagcaaaaagaagtacttcctgcagacc
accaccccgctcgactacgagaaggtcaaggactacaccatagagattgtggccgtggac
tctggcaatcccccactctctagtaccaactccctcaaggtacaggtggtagatgtcaat
gacaatgcacctgtcttcacccagagcgtcactgaggttgccttcccagaaaacaacaag
ccaggtgaagtggtcaccgaagtcactgccagtgatgctgactcgggctctaatgctgag
ctggtttactctctggagcctgagccagccgccaagggcctcttcaccatctcacctgag
actggagagatccgggtgaagacatcccttgatcgggaacagcgggacagttatgagtta
aaggtggtggcagccgaccggggcagcccgagcctgcagggcacagccaccgtcctcgtc
aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctca
gtgatggagaacatgccggcactgagtccagtgggcatggtgaccgtcattgatggggat
aagggggagaatgcccgggtacagctcacagtggagcaggacaatggtgactttgttatt
cagaatggcacgggcaccattctctccagcctgagctttgatcgggaacagcaaagcacc
tatacattccagctgaaggcggtggatggcggtgtcccacctcgctcagcttatgttggt
gtcaccatcaacgtgctggacgagaatgacaatgcgccttttatcactgccccttccaac
acctcccaccggctgttgaccccccagacacgtcttggtgagacggtcagccaggtgaca
gctgaggacattgactctggtgtcaatgctgagttgacctatagcattgctggtggcaac
ccttacggactcttccagatcgggtcacattcaggtgccatcaccctcgagaaggagatt
gagcggcgccaccacgggctgcaccgcctagtggtaaaggtcagtgaccgtggcaagccc
ccacgctatggcacagccttggtccacctttatgtcaacgagaccctggccaaccgcacc
ctgctagagaccctgctgggccacagcctggacacgccattggacattgacattgctggg
gatccggaatacgagcgctccaagcagcgtggcaacatcctctttggtgtggtggctggt
gttgtggctgtggccttgctcattgccctggcagtgcttgtgcgctactgccggcagcgg
gaagccaagagtggctaccaggccggaaagaaggagaccaaggacctgtatgcccccaag
cccagcagcaaagcctccaagggaaacaaaagcaagggcaagaagagcaagtccccaaag
cctgtgaagccagtggaagatgaggacgaggccgggctgcagaaatccctcaagttcaac
ctgatgagcgacgcccctggggacagcccccgcatccacctgcccctcaactatccaccg
ggcagccctgacctgggccgccactaccgctctaactccccactgccttccatccagctg
cagccccagtcaccctcggcctccaagaagcaccaggtggtgcaggacctgccacctgca
aacacattcgtgggcacaggtgacaccacgtccacaggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcaca
ttctccgccaccagtcaggcccaggagctgcaggacccgtcccagcacagttactatgac
agtggcctggaggagtctgagacgccgtccagcaagtcgtcctcgggaccccgactaggc
cccctggccctgcccgaggaccactacgagcgcacgacgcccgatggcagcataggagag
atggagcaccctgagaacgacctgcgccctttgcctgatgtcgccatgacaggcacatgt
acccaggagtgcagcgagtttggccactccgacacgtgctggatgcctggccagtcgtct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgtgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cctgcagccacaccggcatctgcccagacagccaagcgtgagatctacctgtga
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