Panthera leo (lion): 122219566
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Entry
122219566 CDS
T10741
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plez04515
]
122219566 (PCDH12)
Cell adhesion molecules [BR:
plez04515
]
Cadherins
Protocadherins
122219566 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Syndecan
Motif
Other DBs
NCBI-GeneID:
122219566
NCBI-ProteinID:
XP_042793841
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Position
A1:complement(117703304..117718350)
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AA seq
1209 aa
AA seq
DB search
MIQLLPLLLGLLGPGGYLVLPGGCQEVATLTVRYQVSEEVPSGTVIGKLSRELGWEERHG
QTGTAFQILQLPQALPIRVDPEDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHEPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGNPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASQP
SLVSEALPKDSFIALVMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNTTLDR
EQWPKYTLTLLAQDQGPQPLSARKQLSIHISDANDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGINGKISYHIQESPVSHLVAIDSDTGEVTALRSLDYEHMAGFEFRVIAEDW
GQPQLASSVSVWVSLLDVNDNAPEVIHPVLVDGKASLSVLVNASTGHLLVPVETPNGLGP
VGADTTPLTTHSSRLFLLTTIVARDADSGANGELLYSIRSGNEARLFVLNPHLGQLFINI
TNASSLVGSEWELEIVVEDRGSPSLQTRALLSVLFVTSVDHLRDRAREPGTLSTSVLTVI
CLVVLLAIFGLVLALIMSICRTEKKDSGVYNCREAKSTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPSEVGQPHQDAGKEGTMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGALAESQE
VLQDTVNLLFHHPRQRNASRENLNIPESQPVMGQPRSRPPKAMGSPAGRLPGDAGSEEAP
LSPPASSATLRRQRNLNGKVTPEKETGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSGGRSTVPDTDGPGARAGSQAEPDQEEGPLD
SEDDLSVKQLLEEELSNLLDPHTGLALDRLSVPDPAWMARLSLPLTTNYRDNVFSPDTPA
MEEPRTFQTFGKATGPELSLTGTQLASTFVSEMSSLLEMLLEQRSSVPVEAASEVLRRLS
VCGRTLSLDLATSGASGAEGQGGPGGKKGAEGRTGSSSSSSSSSRGLWIQEPGMLGSPGA
KDPGTRAAF
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgatacaacttctgccacttctgctggggcttttggggccaggtggctacttggtcctt
ccagggggttgtcaggaggtggccactctcactgtgagataccaagtgtcagaagaagtg
ccgtctgggacagtgataggcaagctgtcccgggaactgggttgggaggagaggcatggg
caaacggggactgccttccagatcttgcagctgcctcaggcgctccccatccgggtggat
cctgaggacggcctgcttagcacagggaggcggctggaccgagagcagctttgccggcag
caggatccctgcttggtttcctttgacgtgcttgccacaggggatttggctctgatccac
gtagagatccaggtgctggacatcaatgaccatgagccacagtttcctaaaggcgagcag
gagctggaaatctctgagagtgcctctctgcgcacccggatacccttggacagagctctg
gacccagacactggccccaacaccctgcactcctacacgctgtctcccagcgagcacttt
gccctggatgtcatcgtggggcctgatgagaccaaacatgcggaacttgtggtggtgaag
gagctagacagggaaatccactcattttttgatctggtgctaactgcctatgacagtggg
aacccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaac
agccctgtgtttgctgagagctcactagcactagaaattcaagaagatgctgcccctggt
actctcctcataaacttgactgccacggaccctgatcaaggccccaatggggaggtggag
ttcttcctcagtaagcacgtgcctccagaggtgctggacaccttcagtatcgatgcaaag
actggccaagtgattctgcgtcaacccctagactacgagaagaatcctgcatatgaggtg
gatgtccaggcaagggacttgggtcccaatcccatcccagcccattgcaaagtactcatc
aaggttctggacgtcaatgacaatgccccaagcatccacattacatgggcctcccagcca
tcgctggtatcagaggctcttccaaaggatagtttcattgctctcgtcatggcaaatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagaactgggtcacttt
agactgaaaaggaccaatggcaatacatacatgctactaaccaacaccacactggacaga
gagcagtggcccaaatataccctcactctgttggctcaagaccaaggaccccagccctta
tcagccagaaaacagctcagcattcacatcagtgatgccaatgacaatgcacctgtgttt
gagaagagcaggtatgaggtctctactcgggagaacaacctaccttctcttcacctcatt
accatcaaggctcatgacgcagacttgggcattaatggaaaaatctcataccatatccag
gaatccccagtttctcacttggtagctattgattcagacacaggagaggtcactgctctg
aggtcactggactatgaacacatggctggttttgagtttcgtgtgatcgcagaggactgg
gggcagcctcaacttgcatccagcgtctctgtgtgggtcagcctcttggatgtcaacgat
aatgccccagaggtgattcatcctgtcctcgttgatggaaaagccagcctctcagtgctc
gtaaatgcctccacaggccaccttctggtacccgttgaaactcctaatggcttgggtcca
gtgggtgctgatacaacaccactgacaacccacagttcccggctgttccttttgacaaca
attgtagcaagagatgcagactcaggtgcaaatggagagctcctctacagtattaggagt
ggaaatgaagcccgtctctttgttctcaacccccacctggggcagttgttcatcaacatc
accaatgccagcagtctcgttgggagtgagtgggagctggagatagtggtagaagaccgt
ggcagcccctccttgcagacccgagccctgctgagcgtcttgtttgtcactagtgtggac
cacttgagggacagggcccgtgagcctgggaccctgagcacatcggtgctgacagtgatt
tgcctggtcgtacttctggccatctttgggttggtcttggctctgatcatgtccatctgc
cggacagagaagaaggacagtggggtgtacaactgtcgggaggctaagtctacctatcgc
caccagcccaagaggccccagaaacacattcagaaggcagacatccaccttgtgcctgtg
ctcaggggtcaggtggatgagcccagtgaagttgggcagccccaccaggatgcaggcaag
gaagggacgatggaagcaggctgggacccctgcctacaggccccctttcacctcactcca
accctgtacaggaccctgcgtaaccaaggcaaccagggagcactggctgagagccaagag
gtgctgcaggacactgtcaacctccttttccaccatcctaggcagaggaacgcctccagg
gagaacctgaacattcctgagtcccagcctgtgatgggccagccacgctcaaggcccccg
aaggctatgggcagccccgcagggaggctgccaggagacgcaggcagcgaggaggctcca
ctgagtccaccagcctcctctgcaaccttgaggcggcagcggaatctcaatggcaaagtg
acccctgagaaagagacaggtccccgtcagatcctgcggagcctggtccggctatctgtg
gctgcctttgcagagcggaaccctgtggaggaactcacgatggattcccctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcggcggcaggagcacagtcccagacacagat
ggcccaggtgccagggctggtagccaggcagaaccagaccaggaggaagggcccctggat
tctgaagatgatctctctgtgaagcagctgctagaagaagagctgtcaaacctgttggac
ccccacacaggcttggccctggaccggctgagcgtccctgatccggcctggatggcgagg
ctctctttgcccctcaccacgaactaccgtgacaacgtgttctcaccagacactccggcc
atggaggagccgaggacctttcagacgttcggcaaggcgacggggcctgagctgagcctg
acaggcacgcagctggccagcacctttgtctcggagatgagctcactgttggaaatgctg
ctcgaacaacgctccagcgtgcctgtggaggctgcctccgaggtgctgcggaggctctct
gtctgcgggagaaccctcagtctggacctggccaccagcggggcctcgggcgcagaagga
caggggggcccaggtggaaagaagggggccgagggcaggactggcagcagcagcagcagc
agcagcagcagcagggggctgtggatccaggaaccagggatgttagggagcccaggcgct
aaggatcctgggacacgagctgctttctaa
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