Panthera leo (lion): 122223859
Help
Entry
122223859 CDS
T10741
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
plez Panthera leo (lion)
Pathway
plez03013
Nucleocytoplasmic transport
plez03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122223859 (UPF2)
03015 mRNA surveillance pathway
122223859 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plez03019
]
122223859 (UPF2)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122223859 (UPF2)
mRNA cycle factors
P-body specific factors
122223859 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
122223859
NCBI-ProteinID:
XP_042800798
LinkDB
All DBs
Position
B4:complement(10784916..10895223)
Genome browser
AA seq
1307 aa
AA seq
DB search
MSVFSRSATPALSQGHRHAGGMETRTVCDQIVLGNIMPAERKKPASMEEKETLLNNKEKD
CSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKLEEDKRKKEDKERKKKEEEKVKAEE
ELKKKEEEEKKKHEEEEKKKQEEQVKRQQEEEAAQLKEKEESLQLHQEAWERHQLRKELR
SKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTITEQQRDSLSHDFNGLNLSKYIAEA
VASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQVWKKHFEARKEEKTPNITKLRTD
LRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRESHTHVSVVISFCRHCGDDIAGLVPR
KVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTSLTKHLKRDHRELQNTERQNRRIL
HSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDENMPDLPQDKPTPEEHGPGIDIFT
PGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAILFKDNEKSCQNKDSNKDDSKEAKE
PKDNKEVPNPEDLELELENLEINDDTLELEGGDEAEDLTKKLLDEQEQEDEEASTGSHLK
LIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRKKLVRALFIVPRQRLDLLPFYARL
VATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFTKNDTL
HCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYV
TMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPWQDQEV
KDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFN
QRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSSLDPPEHLFRIRLVCTI
LDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMISDTLELLRP
KIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKESMTEGENLEEDEEEEEGGAETEEQ
SGNESEVNDPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHV
PCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLGGGEGEAES
ADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQ
EDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttttctcgcgatccgccaccccagcgttaagccaagggcatcgtcatgccggc
ggaatggagacccggacagtttgcgatcagattgttctgggtaacataatgccagctgag
cgtaaaaagccagcaagtatggaagaaaaagaaactttactaaacaacaaggaaaaagac
tgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggagatcaaacttact
gccaagaaggaggttattaaggtccctgaagataaaaagaagaaactggaagaagataag
agaaaaaaagaagacaaggaacgaaagaaaaaagaagaagaaaaggtgaaggcagaggaa
gaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaagagaaaaagaag
caagaagagcaggtaaaacgtcagcaagaagaagaagctgcccagttgaaagagaaagaa
gaatcccttcagcttcatcaagaagcttgggaacgacatcagttaaggaaggaacttcgt
agcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttctttagccgactagac
tcaagcttgaagaaaaatactgcttttgtcaagaagttaaaaactattacggaacaacag
agagactccttgtcccatgattttaatggcctaaatttaagcaaatacattgcagaagct
gtagcttctattgtggaagcaaagctgaaaatatctgatgtgaactgtgctgtgcacttg
tgctctctctttcaccagcgttatgccgactttgctccgtcacttcttcaggtttggaaa
aaacattttgaagcgaggaaagaagagaaaacccctaacattaccaagttaagaactgat
ttgcgtttcattgcagaattgacaatagttgggattttcactgacaaggaaggtctatcc
ttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcccatactcacgtt
tctgtggtgattagtttttgtcgacattgtggagatgatattgctggacttgtaccacgg
aaagtgaagagtgccgcggagaagtttaatttgagtttccctcctagtgagataattagt
ccagagaaacaacaacctttccagaatcttttaaaagagtactttacatctttgaccaaa
cacctgaaaagggaccacagggagcttcagaatacagagagacaaaacaggcgtattctc
cattctaaaggagagctaagtgaagatagacataaacagtatgaggagtttgctatgtcg
tatcagaagttgctagcaaattctcaatccttagcagaccttttggatgaaaatatgcca
gatcttcctcaagacaaaccaacaccagaagagcatgggcctggaattgatatctttaca
cctggtaagcctggagaatatgatttggaaggtggtatttgggaagatgaagatgctcgg
aatttttatgagaacctcatcgatttgaaagcttttgttcctgccatcttgtttaaagat
aatgagaaaagttgtcagaataaagattccaacaaagatgattccaaagaggcaaaagaa
cctaaagataataaggaggtaccgaatcctgaagatttggaacttgagttggagaaccta
gaaattaatgatgataccttggaattagaaggtggagatgaagctgaggatcttacaaag
aaacttcttgatgagcaagaacaagaggatgaagaagccagcactggatctcatctcaag
ctcatagtagatgctttcctacagcagttgcccaactgtgtcaaccgagatctgatagac
aaggcagcaatggatttttgcatgaacatgaatacaaaagcaaataggaagaagctggta
cgggcgctcttcatagttcccagacaaaggttggatttgctaccattttatgcaagattg
gttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttccatgctgagg
ggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaaacgaagaacaaa
actgttcgttttattggagaattaactaaatttaagatgttcacaaaaaatgatacacta
cattgtttaaagatgcttctatcagacttttcccatcaccacattgaaatggcatgtact
ctactggaaacatgtggaagatttcttttcagatctccagaatcacacctgaggaccagt
gtacttttggaacaaatgatgagaaagaagcaagcaatgcatcttgatgcaagatacgtt
acaatggtggagaatgcatattactactgcaacccacctccagctgaaaaaacagtgaaa
aagaaacgtcctcctctccaggaatatgtccggaaacttttatacaaggatctctccaag
gttaccactgagaaggttttgagacagatgcgaaagttgccctggcaggaccaagaagtg
aaagactatgttatttgttgtatgataaacatctggaacgtgaaatataatagtattcat
tgtgtagccaacctcttagcaggactggtactctaccaagaagatgttggaatccatgtt
gtggatggagttttagaagatattcgattaggaatggaggttaatcagcctaaatttaac
cagagacgtatcagcagcgccaagttcttaggggaactttataattatcgaatggtggaa
tcagctgttatttttagaactctttattcttttacttcatttggtgttaacccggatggc
tctccaagttcactagacccccctgagcaccttttcagaattaggctagtgtgcactatt
ttggatacctgtggccagtactttgacagaggttctagtaaacgaaaacttgattgcttc
cttgtatactttcagcgttatgtttggtggaagaaaagtttggaggtttggacaaaagac
catccatttcctattgacatagattacatgatcagtgatacactagaactgctaagacca
aagatcaaactctgtaattctctggaagaatccatcaggcaggtacacgacttggaacga
gaattcttaataaaactaggcctagtaaatgataaagattcaaaagagtctatgacggaa
ggagaaaatcttgaagaggatgaagaagaagaagaaggaggagctgaaacagaagaacaa
tctggaaatgaaagtgaagtaaatgacccagaagaagaggagggttctgataatgatgat
gatgagggcgaggaagaagaggaagagaataccgattaccttacagattcaaataaagag
aatgaaacagatgaagaaaatactgaggtaatgattaagggaggtggacttaagcatgta
ccttgtgtggaagatgaggacttcattcaagctctggataaaatgatgctggaaaacctt
cagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgctattcctttgcat
ctcaaaagccagctgaggaaagggccaccactcggtggtggggagggagaggcggagtct
gcagacactatgccctttgtcatgttaacaagaaaaggcaataaacaacagtttaagatc
cttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccagcaacaggcagaa
caagaagagaggatgagaatgaaaaagctcacactagatatcaatgaacggcaagaacaa
gaagattatcaagaaatgctgcagtctcttgcccagcgcccagccccagcaaacaccaat
cgggagcggcggcctcgttaccaacatccaaagggagcacctaatgcggatctaatcttt
aagactggtgggaggagacgttga
DBGET
integrated database retrieval system
