Panthera leo (lion): 122224438
Help
Entry
122224438 CDS
T10741
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plez04121
]
122224438 (PDZRN4)
Enzymes [BR:
plez01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122224438 (PDZRN4)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122224438 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-RING_5
zf-C3HC4_4
zf-rbx1
PDZ_Tricorn
TRAF3_RING
zf-RING_6
U-box
Motif
Other DBs
NCBI-GeneID:
122224438
NCBI-ProteinID:
XP_042802197
LinkDB
All DBs
Position
B4:68428718..68791878
Genome browser
AA seq
1037 aa
AA seq
DB search
MGFALERFAEAVDPDFECKLCGQVLEEPLCTPCGHVFCASCLLPWVARRRRCPLQCQPLA
PGKLCRVLPLRSLIQKLRIQCDYRARGCGRSVPLHELAAHVERCDFSPARRRRRGCASGP
GGRGGGDVPARGGCATAPGPGRGGGARGGPPGVRGGSGRGPRPRVLAWRRREKALLAQLW
ALQGEVQLSARRYQEKFAQYMAHVRNFARDLGGGHGPDEEHKPLTIVLERENDTLGFNII
GGRPNQNNKEETSKEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSKPAYGTAPEVQLMDASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSEECKRI
VLLVARPETQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQRTANEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSRRELGKSQDTLGSVE
LQCNESFASGEYIDSDCIGNPDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECHQGEQ
EGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRG
KLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRTTMAAN
QSSSGLSSKESTSPKAKTTEPGCSIEGKEKISESGKLSDQEQSSSEHIPYLSPYHSSSYR
YANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTR
YITKRPVRDRILRERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGRKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTRVHNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttcgagtgcaagctg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcggacacgtcttctgcgccagc
tgcctgctgccctgggtggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcaagctgtgccgggtgctgcctctgcgcagcctcatccagaagctgcgcatccag
tgcgactaccgcgcccgcggctgcggccgctcggtcccgctgcacgagctggcggcgcac
gtggagcgctgcgacttcagccctgcccgccgccgccggcggggctgcgcctcggggccc
ggcggccgcggcggcggggacgtgcccgcgcgggggggctgcgccacggcgcctgggccc
ggccggggcgggggcgcgcgcggggggccgccgggcgtccgcggcggcagcgggcggggg
ccccggccgcgagtcctcgcctggaggcggcgcgagaaggcgctgctggcgcagctctgg
gcgctgcagggcgaggtgcagctctcggcccgcaggtaccaggagaagttcgcccagtac
atggctcacgtccgcaacttcgccagagacctgggcggcggccacggcccggatgaagaa
cataaaccactcaccattgtgttagaaagagaaaatgacacgttggggttcaatattata
ggaggtcgaccaaatcagaataataaggaagaaacatcaaaggaaggcatttacgtttca
aaaattttggaaaatggacctgccgacagagcagatggcctggagattcatgacaaaatc
attgaggtcaatgggaaggatctctcaaaggccacccatgaagaggcagtggaagctttt
cgaaatgccaaggaacccattgtggtccaggtgctaagacggacgcctctcagtaaaccc
gcatatggaacggccccggaagtgcagctcatggacgccagcactcagacagacatcacc
tttgaacacatcatggctctggccaaacttagaccacctacccctccagtgccagacatc
tgtccatttctgctctcagacagctgccattctcttcatccgatggagcatgaattttat
gaggacaatgagtatctttccagcttgcctgctgatgcagacagagcagaggactttgaa
tatgaggaggtcgagctgtgtcgtgttagcagtcaagagaagctgggcctgacagtctgt
taccgaacggatgatgaagaagacacgggcatttatgtcagcgaggtagatccaaatagc
attgctgccaaagatggccgaattcgagaaggggatcgtattttgcaaataaatggggaa
gacgtccagaatcgagaagaagcagtggcgttgctgtcgagcgaggagtgtaagagaatc
gtgttgctcgttgcaaggccggagactcagctggatgaaggctggctggaagatgaaagg
aatgagttcttagaggagttaaacttggagatgctggaagaacagcataatgaagcaatg
cagcgcacggccaatgaggtggagcagccaaaaaaacaagaagaagaagagggcacaaca
gatacagcaacgtcctcctctaacaaccacgagaaagacagtggggtggggcgcacagat
gaaagcttgcggaacgatgagagctcagagcaggagaacgcagcagaggatcccaacagc
acatccctgaagagcaggagagagctgggaaagagccaagacactctaggaagcgttgaa
cttcagtgcaatgagagcttcgcatctggtgaatacatagactcagactgcattggcaac
ccagatgaggagtgtgaaaggttccgacagctcttggagctcaaatgcaagattcggaac
catggagaatatgacctgtattactcgagcagcacaatagaatgccatcaaggggaacaa
gagggagtggagcacgaactacagttgcttaacgaagaactgagaaacattgaactggag
tgccagaatatcatgcaggctcacaggctccagaaagtgacagaccagtatggagacatc
tgggctttgcacgatggaggattccggaattacaacaccagcatagacatgcaaagggga
aagctagatgacatcatcgaacacccagaaaagtcagacaaggacagttctagcgcttac
aacacagctgaaagctgcagaagcactccactcactgtggaccgttcccctgacagttcc
cttccaagagtgatcaacctcaccaataagaagaacctgagaaccacaatggccgccaat
cagtcttcttccgggctgagcagtaaagagtcgacctcccccaaagccaaaaccactgaa
ccaggttgcagcattgaaggcaaggagaagatttcagagagcggcaagctttctgatcag
gagcaaagcagcagtgaacacatcccttacctctccccttaccacagctcctcctacaga
tatgcaaacatcccggcccatgcccgccattatcaaagctacatgcagttgattcaacag
aaatctgcagtggagtatgcgcagagtcagctgagtttagtgagcatgtgcaaggagtct
cagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagcgacgggacgcgg
tacataacaaagagaccggtacgagaccggattctgagggaacgtgccttaaagatcaag
gaggagcgcagtggcatgacgacggatgatgacaccatgagcgagatgaaaatgggccgc
tactggagcaaagaggaaagaaagcaacacctggttcgggccaaggagcagcgtcggcgc
cgggagttcatgatgcggagccggttggagtgtctcaaggagagcccccagagcggcagc
gagggcagaaaggagatcaacatcattgaactgagccacaaaaagatgatgaaaaaaaga
aacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggggccaag
tctcctgatggcacacgagttcataatgcctttttgtcagtcaccaccgtatga
DBGET
integrated database retrieval system
