Panthera leo (lion): 122225156
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Entry
122225156 CDS
T10741
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
plez Panthera leo (lion)
Brite
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122225156 (TNRC6B)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122225156 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
122225156
NCBI-ProteinID:
XP_042803817
LinkDB
All DBs
Position
B4:132701162..132950912
Genome browser
AA seq
2020 aa
AA seq
DB search
MARQFLMSHLQLRGERSVGAGEENLTWPPGSVAAGGSGASPACSTHSTADREGEAPGPTV
AVVHNPTLPSCSCLSGSQCRRVLVFCTECSLDSSSRACVAPEYCRRRYLCVSAEFCTESV
PMQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDK
KKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSA
ARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPPTAPGANSNNAQVTGTL
LQSDGGTAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIWDKVIVDGSDMEEWPCI
ASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDP
KTKSVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGNPRKG
ALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNL
SSPNPMENKGMPFGMGLANASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNS
GNNGNNGKDREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMT
SGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSS
STGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGW
GQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGEL
SASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKPSSSWNENSSKDQGWGGGRQPNQGWT
SGKNGWGEEVDQAKNSSWESPASKPVSGWGEGGQNEIGTWGNSGNTSLASKGGWEDCKRS
PAWTETGRQPNSWNKQHQQQQQPQQPPPPQPEASGSWGGPPPAPPGNGRPSNSNWSSGPQ
PVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREP
NLPTPMTSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNAPSNAP
NAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTAGSQGSASSHNSASWGQGGK
KQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLPDKKFDVDKRAMN
LGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPS
YKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGNHGLFGNSTAQSRGMHTPVQPLNSSPN
LRAQVPPQFISPQTCLVGGYGMNTAEVELFQHHRKLRVSASMLKQFPNSGLNPGLFNVGP
QLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSA
LQQQQQQQQQQQQQQRQPGMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGS
GFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSP
YNQFDIIPSDTLGGHTGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNID
PESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFT
NVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSP
WSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGP
LLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPP
TPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLW
GPPNYSSSLWGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcagtttcttatgagccatttacagcttcgaggagagcgcagtgtgggcgcc
ggagaggaaaacctgacgtggcctccagggagtgttgccgccgggggaagtggagcctct
cccgcctgcagcacacacagcactgcagacagggagggagaggctcccggccccactgtc
gctgtcgtgcacaaccccaccttgccctcctgctcctgtctctcaggttcacagtgcagg
agggttttggttttttgcactgaatgtagtctagactcatcttcacgggcttgtgttgcc
ccagaatactgtcgaaggcggtatttgtgtgtttctgcagagttttgcacagagtctgtt
ccaatgcaaaccaatgagggagaagtgtcggaagaaagcagttccaaggtggaacaggag
gattttgtaatggaagggcatggcaagactccacctcctggtgaagaaagcaaacaagag
aaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataaa
aagaaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacg
aaaccaagtttaagccaaccaacggccgccagcccaattggcagctctccatcgccacca
gtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgcc
gcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtg
ttactaaaacgtgggcagccccctccaccatcctgcatgctcctcgggggcggggcaggg
cctcctccccccacggcacccggagcaaactccaacaacgcacaagtgacaggaacgctg
ctgcagagtgacggtgggactgcaccagagtcaacccttggaggtgctgctgcttcaaat
tatgcaaattccacttggggcccgggagcctcctccaacaacggcgcctcccccaaccca
attcacatctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtatc
gccagcaaagacactgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaac
cctggctctgagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagc
cagtgccagtctgcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccct
aagactaaatctgttcaatcttccaactctactacagagagcaacaatggactaggaaat
tggaggaatgtgagtggtcaggatagaattggacctggctctggcttcagcaactttaac
ccaaatagcaacccatctgcctggccagcgctggtccaagaaggaaatcctaggaaaggg
gcattggaaacggatactagtaattccagtgcacaggttagcacagtaggtcaggcatcc
agggaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaa
caggctcaaattcataacactgatggaccaaaaaatggaaacactaactccttgaactta
agttcaccaaaccccatggagaataagggaatgccctttggaatgggcttggcgaacgcc
tccaggagcactgatgccccttcacaaagcactggagatcgaaagactgggagtgttgga
tcttggggtgcagctagggggccttctggaactgacacagcctctggacaaagcaattct
ggaaacaatgggaacaatggaaaggatagagaggactcctggaaaggagcctctgttcag
aaatcaactgggtcaaaaaatgactcttgggacaacaataacaggtctacgggtgggtcc
tggaactttggccctcaggactctaatgacaacaaatggggtgaagggaacaaaatgaca
tctggggtctctcagggagaatggaaacagccgactgggtctgatgagttgaaaattgga
gaatggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggc
caccccctccctgaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagc
tccacaggaagtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagt
gacagtcataattctggccgtcggtcataccggcccacacatcctgattgtcaggctgtc
ttacagactcttttgagccgaactgatttggaccccagggtgctctcaaacactggctgg
ggccaaactcaaattaagcaggacacggtgtgggatatcgaagaggtgccaaggcctgag
gggaaatctgacaaaggaactgaggggtgggagagcgctgccacacagaccaagaactca
gggggctggggagatgcacccagccaaagcaatcaaatgaagtctggatggggggagctc
tcagcctctacagagtggaaagaccccaagaacacaggaggctggaatgactacaagaac
aacaactcttccaactggggaggcggccgaccagatgaaaagccatcttcctcttggaat
gagaactccagcaaggatcaggggtggggagggggacgccagcccaatcaaggatggact
tctgggaagaatggttggggagaggaagtcgaccaggcgaaaaacagcagttgggaaagt
cctgcaagtaaacccgtgtctgggtggggcgaaggagggcagaacgaaatcggaacttgg
gggaacagtgggaatacaagcctagcttccaaaggtgggtgggaagattgcaaaaggtct
ccagcatggaccgagacaggcagacagcccaattcctggaataaacagcaccaacagcag
cagcagccacagcagccaccgccaccacaaccagaggcttctggttcatggggaggccca
cccccagcacccccaggcaacggacgaccttccaattccaactggagcagcgggccacag
ccagtaacccctaaggatgaggaacccagtggttgggaagagccatccccacagtcaatt
agtcggaaaatggacatcgatgatggcacttccgcatggggagaccctaacagttataac
tacaagaatgtgaatctgtgggataagaattcccaagggggcccagcacctcgagaacca
aacctgcccaccccgatgaccagtaaatcagcatcagtctggagcaaaagcacaccacct
gctccagataatggtacttcagcttggggtgagccaaatgaaagcagtcctgggtggggc
gaaatggacgacactggagcatcgaccacgggctgggggaacgcaccctccaacgctcca
aatgccatgaaacctaattccaaatctatgcaagatggctggggggagagtgacggtcca
gtgacgggaactcgccatcccagctgggaagaggaggacgatggaggagtctggaatacc
gccggctctcagggaagtgcttcctcccacaactcagcaagctggggacaaggaggaaag
aagcagatgaagtgttcactgaaaggaggaaacaatgattcatggatgaatcctcttgcc
aaacagttttcaaatatgggattgctgagtcaaactgaagataatccaagcagcaaaatg
gatttgtctgtagggagccttccagataaaaaatttgacgtggacaagagagcgatgaat
ctcggggattttaatgatatcatgaggaaggatcgatctgggttccgtccacctaattcc
aaagacatgggaaccacagatagtgggccttattttgagaagctgactttgcctttctcc
aatcaagatgggtgccttggggatgaggctccctgctctcccttctccccttctcccagc
tacaagctgtctccctctggttccacactacccaacgtcagccttggagcaatcggcaca
gggctcaacccccaaaacttcgctgctagacaaggtggcaatcatggtttgtttggaaat
agcacagcacaatcgagaggtatgcacacgccagtgcagccgctaaattcttctcctaat
ctccgggcgcaagtgcctccccagtttatttccccccagacatgcctggttggtggctac
ggaatgaatactgcagaggtggagcttttccagcatcacagaaagctaagggtttctgcc
tcaatgctcaagcagtttcccaacagtggcctgaatccaggtcttttcaatgtggggccc
cagttatctcctcaacaaattgccatgctgagccagcttccacaaattccccagtttcag
ttggcatgtcagcttctcctgcagcagcagcaacaacagcagttgctacagaaccagagg
aagctttctcaagctgtgcgccagcagcaagagcagcagctggctcgaatggtgagcgct
ctccagcagcagcaacagcagcagcagcagcagcagcagcagcagaggcagcccggcatg
aagcactcgccctctcatcccgttgggcccaagccgcatctggacaacatggtacccaac
gctctgaatgtggggctcccagaccttcaaaccaaagggccaatacctggatatggttct
ggcttcagctctggcggcatggactatggcatggttggcgggaaggaggctggaacagag
tctcgcttcaaacagtggacctccatgatggagggcctgccctctgtagccacacaggaa
gccaatatgcacaaaaatggcgctatagtggcccctggtaagactcgaggagggtcacca
tacaaccagtttgatatcatcccgagtgacacgctgggtggccatacgggtcctgctggt
gatagctggttacctgccaaatctccaccgacaaataaaatcggaagtaaatccagcaat
gccagttggcctccagaattccaaccaggagtgccatggaaaggtatccaaaacattgac
cctgaatctgacccctatgtcaccccaggaagtgtgctggggggtacagccacatctccc
attgtagatactgaccaccaacttctgcgggataacaccacagggtctaattcttccctc
aacacctcgctgccttcacctggtgcctggccctacagtgcctctgacaactcctttacc
aacgttcatagcacttcagcaaagttccctgattacaaatcaacatggtccccagatccc
ataggacacaaccccactcatctctccaacaagatgtggaaaaaccatatttcctcaagg
aacactacaccgctgccccgcccacctcctggtctgaccaaccccaaaccatcatctccc
tggagcagcacagcaccccgatcggtcaggggttgggggacacaggactcacggcttgcc
tcagcctctacttggagtgatggtggttcagttcgtcccagttactggctggttcttcac
aatctcactccacagattgatgggtcaacgttgagaaccatctgcatgcagcatggccca
ctgctgacattccatctgaacctaacccagggcactgccctgatccgatacagcaccaaa
caggaggcagccaaggcccagactgcactgcacatgtgtgtgttgggaaacactaccatc
ctggctgagtttgccaccgatgatgaagtcagccgctttctggcacaagctcagcccccc
acacctgcagcaaccccaagtgcacccgccgcaggttggcagtcgctggagaccggccag
acccagtcagatcccgtcggacctgctttgaatcttttcggtgggtccacagggctcggg
cagtggagcagcagtgctggcggcagcagcggggccgatcttgctggcgcttcgttgtgg
gggcccccaaactattcttctagcttgtggggagtcccaactgtggaagatccccatagg
atgggcagccctgctcccttactacctggtgaccttctgggaggagggtcggattcaatc
tga
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