Panthera leo (lion): 122225255
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Entry
122225255 CDS
T10741
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
plez Panthera leo (lion)
Pathway
plez04110
Cell cycle
plez04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122225255 (SMC1B)
04114 Oocyte meiosis
122225255 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plez03036
]
122225255 (SMC1B)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122225255 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
122225255 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
ATG16
Ca_chan_IQ
CTD12
Motif
Other DBs
NCBI-GeneID:
122225255
NCBI-ProteinID:
XP_042804032
UniProt:
A0A8C8Y408
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Position
B4:complement(137048999..137125260)
Genome browser
AA seq
1235 aa
AA seq
DB search
MGRLEVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIYGAHIGKPVSSCASVKIVYVEESGEEKTFTRIIRGGCSEFHFDDNPVSRSAYIAE
LEKIGVMVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRKLLKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKINKIQLQLFQLYHNERKIHFLNT
ELERVNRNLSVTKESLSDHENIVKAKKKEHGVLTRKLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQCSKQEEDIKALETELVDLDGAWRSFEKQVEEELLY
KGRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQRADKERLAFEKRRHGEVQEN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVVEIENTKSRMSEVNEELNLI
RSELQNAGIDNHEGKRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGH
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKEIKNLKDRRTQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKQLAAFYREQSQLQSELLNIESQCTMLSEGVKERQQRIEEFQKEIDKVEDDIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTLLNIQLEYSRNQLKKKLNKIRTLEE
TIEKGREDIDNLKKAEETCLQIVDELMAKRQQLKDVFVAQNANTEKVQAQLEEERKKVLA
IDREVAKWQKEVVIIQTSLEQKRLEKHNMLLDCKVQDLEIILLLGSLDDIVEVELGTEAE
STQATSDIYEKEAAIEVDYSSLGEDLKALQTDKEVEARLRLLLQQVASQEEVLLKTAAPN
LRALENLKTVRDKFQESTDAFEASRKEARVCRQEFEQVKKRRYDLFSQCFEHVSVSIDQI
YKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSQADALIGIY
PEFDDCMFSRVLTLDLSQYPDTEGQESSKRNQESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggaggtgttgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccccttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcatttatggagcacatattggaaaacctgtctcttcttgtgcgagtgta
aaaattgtgtacgtggaggaaagtggagaggaaaaaacatttacaaggattatccgaggg
ggatgctcggaatttcattttgatgataatcccgtgagtcgttctgcttacatagccgag
ttggaaaagataggcgtaatggtcaaagcacggaactgtctcgtttttcagggaactgta
gagtcgatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagctcataggagaatatgaggaaaagaaaagaaagttactgaaagccgaagag
gatgcacagtttaattttaataagaaaaaaaatgtggctgcagagcgcaaacatgcaaag
ttagagaaagaagaggcagaacgttaccagagtctccttgaagaactgaaaataaacaaa
atacaattacagcttttccaactatatcataatgaaaggaaaattcattttctgaacacc
gagttagagcgtgtgaacaggaatttgagtgtcacaaaagagtctctttctgatcatgaa
aacatagttaaagccaagaaaaaggaacatggagtgctaactagaaaactacaacaaaca
gaaaaagagttaaaatctcttgaagcacttttaaatcagaaaaggcctcaatacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagatgtggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagaggacataaaggccctggagacagagctg
gttgatttagatggtgcatggagaagttttgagaagcaggttgaggaagaactcttatac
aaagggcgagacattgaactagaagccagtcagctggatcgttataaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacaactggaaaagctgcagtgggaacag
agggctgataaagaaagactggcgttcgagaagaggaggcatggagaagttcaggaaaat
ctaaaacaaataaaagagcagatagaagatcataaaaaacgaatagagaagttggaagaa
tatacgaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gttgaaattgaaaacacaaaatcaagaatgtctgaagttaatgaagaattgaaccttatt
agaagtgaattgcagaatgctggaattgataaccatgagggaaaacgtcagcagaagaga
gcagaagttctagaacaccttaaaagactttacccagattctgtgtttggaagactgctt
gacctctgccaccctattcataagaaataccaactggctgttactaaactttttggtcac
tacatggttgccattgttgtagcctctgagaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaaccggagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagactgagggagattaaaggctgtaaaatgatgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagttcgtatgtggaaatggccttgtctgtgag
actgtggaggaagcaaggcatattgcattcggtggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggaggatcaagtgacttaaaa
tacaaggctagatgctgggatgagaaggagataaagaacttaaaagacagaagaacccag
ctgatccaggaattaaaggatctaatgaagatacttcgcaaggaagctgacttgaaacaa
atacagactctagtacaaggaactcatacacgactcaaatattcccagagtgaactagag
atgattaaaaagaagcaacttgctgctttttaccgggaacaatctcagctacagagtgag
ctgctgaacattgagtctcaatgtactatgttgagtgaaggtgtgaaagaacggcaacaa
cgaatcgaagaatttcaaaaggagatagacaaggttgaagatgatattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaagaaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacagaaaactctgcttaatattcaa
ctcgaatatagtcgcaatcagctgaagaagaagctgaataagatccgtacattagaagaa
accatcgaaaaaggcagagaagacatcgataacctaaagaaggctgaagaaacttgtctg
caaattgtggatgaactcatggcgaagcggcagcaacttaaggacgtatttgtcgctcag
aatgccaacacggagaaggtccaagctcagcttgaagaagaacggaagaaagttctggct
attgatagggaagtggcaaaatggcaaaaagaagttgtcatcattcagacttctttggaa
cagaaacggctagagaagcacaatatgctgcttgactgcaaagttcaagaccttgaaata
attcttttgttgggatcgctggacgacatcgttgaagtggagttgggcactgaagcagaa
agtacccaggcaacgagtgacatctatgaaaaagaagcagccattgaggtagactacagc
tccctgggagaggatttgaaggcgctacaaacggataaagaagtggaggcccgcctcaga
ctcctgctgcagcaggtggcgtcccaggaggaggtcctgttgaagacggcggccccaaac
ctgagagccctggagaacctgaagaccgtcagggacaagttccaggagtccacagacgct
tttgaggccagcagaaaggaagccagagtgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgacctcttcagccagtgttttgagcacgtctccgtctccattgatcaaatc
tacaagaagctctgcagaaacgtcagtgcccaagcatttcttagcccagaaaacccagaa
gagccttacctagagggaatcagctataactgcgtggctccaggcaaacggttcatgcca
atggacaatctgtcggggggagaaaagtgtgtggcagctttggccctcctgttcgcggtg
cacagttttcggcccgctccgttctttgtcttagatgaagtggacgcagccctggacaac
actaacattggcaaagtctcaagttacatcaaagagcagactcaggagcagtttcagatg
ataatcatttccctaaaagaggagttctattcccaggccgatgcgctgataggcatctac
ccggagttcgacgactgcatgttcagtagagttctgaccctggatctttctcagtatcca
gacactgaaggccaagaaagcagcaagagaaaccaagagtcgcgttag
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