Panthera leo (lion): 122226587
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Entry
122226587 CDS
T10741
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
plez Panthera leo (lion)
Pathway
plez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122226587 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plez03019
]
122226587 (BARD1)
04121 Ubiquitin system [BR:
plez04121
]
122226587 (BARD1)
03036 Chromosome and associated proteins [BR:
plez03036
]
122226587 (BARD1)
03400 DNA repair and recombination proteins [BR:
plez03400
]
122226587 (BARD1)
Messenger RNA biogenesis [BR:
plez03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122226587 (BARD1)
Ubiquitin system [BR:
plez04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122226587 (BARD1)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122226587 (BARD1)
DNA repair and recombination proteins [BR:
plez03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122226587 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
ANK_LRRK2
SICA_C
Ank_KRIT1
zf-C3HC4_2
RTT107_BRCT_5
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
122226587
NCBI-ProteinID:
XP_042805981
LinkDB
All DBs
Position
C1:complement(198277939..198361713)
Genome browser
AA seq
773 aa
AA seq
DB search
MPGNRQPRVRSGNEPRPAPAMEPEGRGAWAHSRAAFDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKLSDLKE
DTSRQNVFSDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQVIDDGNAQQASMYKFVS
TSPPTSVPERAKKASTRSGKKQKKKTLAEINQEWNFEAEKEDGEPDSKEEFKEKLVSFCS
QPSVIASPQTNGGIDLLASDSVTESECSRSLTEVSLPLAEQIESPETESRNEDATPENNA
CANHLTSKQSLPSGHNGRPGRRSRRSSPISKRCRSSIPGTSGQQMLLSENKPLPGCFSPP
PSKRKVGDTLRRKNSNISDESMSLSPGTPPSTLNSPSYRRMMFSPSAMKLSPGSLTAVKR
NHRGETLLHIASIKGDLPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNSTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAMNIFGLRPVDYADGENMKSLLL
LPEENESSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKCAEFDNTV
THVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLNK
EQLLPKLFDGCYFYFGGAFKHHPKDNLVKLVTAAGGQVLSRKPKPDSDVTQTINTVAYHA
KADSDQRFCTQYIIYEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaaccggcagccgagggtccggtccgggaacgagcctcgtcccgcgcccgcc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgttcgaccggttggag
aagctgctgcgctgctcgcgttgcactaatattctgagggagcctgtgtgtttaggggga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagctccggaatttgctgcatgacaataagctatcagatttgaaagaa
gacacatctaggcaaaatgtattcagtgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgactaaagtttcagtgcaaacc
cagcctcaagtgatagatgatgggaacgctcagcaggcctcaatgtacaaatttgtctct
acaagtcctccaacaagtgttcctgagagggctaaaaaggcttccacgaggtctggaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaatttcgaggcagaaaaa
gaagatggtgaacctgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
cagccatctgttattgctagtcctcagacaaatggtggcatagacttactagcaagtgac
tctgtaaccgaatcggagtgttctagaagcttaactgaagtctctttaccattggctgag
caaatagagtctccagaaacagagagcaggaatgaagacgcgactcccgagaacaatgcc
tgtgcgaatcatcttacatctaagcagtccttgccatcgggtcataatgggcgacctgga
cgtcgcagcagacggtccagtcccatttctaagagatgcagaagcagcattcctggcacg
agtgggcagcaaatgctgctttcagaaaacaaaccactgcctggctgcttttcaccacct
ccaagcaaacgtaaagttggtgacacattaaggaggaaaaacagtaatatatcagacgaa
tccatgagcctttcaccaggtacaccaccttctacactgaatagtccaagttacagacgg
atgatgttcagcccttcagcaatgaagctgtctcccggtagccttacagctgtgaaaaga
aatcatagaggagagactttgcttcatattgcttcaattaagggcgacctaccttctgtg
gaatacctcttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacacca
ttgcacgaagcctgcaaccatgggcacctgaaggtggtggaattgttgctacagcacaag
gcgttggtgaactccactgggtatcagaatgattcaccacttcatgacgctgccaagaat
gggcacatggatatagtcaagctcttactttcttatggagcctccaggaacgccatgaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaagtcactattgctg
ctaccagaggagaatgaatcatcgtcaactcgccattgctcagtaacaaacactggtcag
cgtagggatggacctctcgtgcttataggcagcgggctttcttcagaacagcaaaaaatg
ctcagtgagcttgcagtgattcttaaggctaaaaaatgtgctgaattcgacaatacagta
actcatgtcattgttcctggagatacagttcaaagtaccctaaaatgtatgcttgggatt
ctcaatggatgttggatcttaaaatttgaatgggtgaaagcatgtctacaaagaaaagca
tgtgaacaggaggaaaagtatgagattcctgaaggaccacagcgaagcaggctcaacaaa
gaacagctgttgccaaagctgtttgatggctgctacttctattttgggggagccttcaaa
caccatccaaaggacaaccttgttaagcttgtcactgcagctgggggccaggttctcagt
agaaagcccaagccggacagcgacgtgactcagaccatcaatactgtcgcgtaccatgcg
aaagctgactccgatcagcgcttctgcacgcagtatatcatctatgaggatctgtctaac
catcgcccagagagggtgcggcagggcaaagtctggatggctccttccagctggtttata
gattgtgtgatgtcctttgagttgctccctcttgacagctaa
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