Panthera leo (lion): 122226716
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Entry
122226716 CDS
T10741
Symbol
COL4A4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
plez Panthera leo (lion)
Pathway
plez04151
PI3K-Akt signaling pathway
plez04382
Cornified envelope formation
plez04510
Focal adhesion
plez04512
ECM-receptor interaction
plez04518
Integrin signaling
plez04820
Cytoskeleton in muscle cells
plez04926
Relaxin signaling pathway
plez04933
AGE-RAGE signaling pathway in diabetic complications
plez04974
Protein digestion and absorption
plez05146
Amoebiasis
plez05165
Human papillomavirus infection
plez05200
Pathways in cancer
plez05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122226716 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122226716 (COL4A4)
04518 Integrin signaling
122226716 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122226716 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122226716 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122226716 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
122226716 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
122226716 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122226716 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
122226716 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122226716 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
122226716 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122226716 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plez04147
]
122226716 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
plez00536
]
122226716 (COL4A4)
Exosome [BR:
plez04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122226716 (COL4A4)
Glycosaminoglycan binding proteins [BR:
plez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122226716 (COL4A4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122226716
NCBI-ProteinID:
XP_042806267
LinkDB
All DBs
Position
C1:complement(208811406..208941255)
Genome browser
AA seq
1686 aa
AA seq
DB search
MASIRCSFRWIKPLATDPWLLILILFSVQHVYASGKKFIGPCGGRDCSVCQCFPEKGSRG
QPGLPGPQGPIGPLGLPGPIGIPGEKGMRGDSGPPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGPRGKPGMHGYNGSRGDPGLPGERGVPGPRGPPGLPGENGEKGNSVFILGAIKGI
PGDRGDPGPPGLPGSRGARGPAGPMGHPGEPGLPGAPGHPGRPGLKGNPGVGVKGQMGEP
GEVGQQGSPGPTLLLQPPDSCLYKGEKGIKGMPGVTGPPGPPGPKGKPGFGAKGEKGVPG
FSGPRGDPGSYGLPGFPGLKGEQGLFGDPGSFGFLGPKGDPGDRGYPGPPGVLVTPSLPL
KGPPGDPGRPGRYGETGSVGPPGPPGPSGPPGETCAGMMGPPGPGGFPGHPGFPGAAGIP
GRADSTPGKPGSPGPPGLPGAPGLQGPPGSDVIYCSVGHPGPQGIKGKAGPPGRRGSKGE
KGNAGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGEKGHPGPPGAEGSPGPPGKPG
AAGPLGSKGEKGDMVVSRVKGEKGERGPDGLPGFPGQQGQHGRDGLPGXKGDPGPPGDHE
DAAPGAKGSPGLPGPPGRTGPKGQPGLGFPGPPGERGPPGAPGRPGERGLEGLKGQKGDT
ISCNVTYPGRPGPPGFDGAPGPKGLPGPPGAPGLRCLDGPKGQRGKPGISEIPGPPGFRG
DKGDPGFGGAKGSSLPGPPGSPGSRGANGQKGTMGDTAYGHPGPPGERGLAGVPGSKGHR
GDPGPPGFAGPAGLPGFPGLKGPRGREGSAGFPGIPGPPGRSCERGAPGTPGQPGLPGAP
GSPGAPGWKGQRGDVGPPGPAGMKGLPGVPGRPGVDGPPGPPGLPGPIGDDGLPGLPGPK
GSQGLPGFPGFPGERGKPGLEGHPGRKGEPGERGRPGFLGDKGVKGAKGARGPPGDEGEM
AVISLKGKPGEPGPPGDSGFPGAEGDKGNPGMQGRRGEPGRYGPPGFHRGEPGRTGHPGL
PGAPGPPGSPGLRGIIGFPGFPGDQGEPGSPGSPGISGSDGLRGPKGNKGDPASQFGPPG
PEGEPGSPGCPGHLGAPGERGFPGVQGPRGPPGRPGLPGSSGPPGCPGDPGVPGLKGHPG
DMGDPGPRGMMGDPGTPGLPGIKGPSGSPGLNGLHGLKGQKGAKGASGSHEVGPPGPMGI
PGPKGETGDPGSPGISPPGLPGEKGPPGPPGRPGSPGPAGATGRAPEGDIPDPGPPGDQG
PPGPDGPRGAPGPPGPPGSVDLLKGEPGDQGLPGPPGLPGPPGPPGRKGFPGCDGQDGQK
GPIGFPGLQGPPGLPGSPGEKGLPGFPGRQGPPGPPGARGEPGPPADVDSCPRIPGLPGV
PGPRGPEGGMGPPGMRGPPGAGCKGESGPDGRRGKDGLPGSPGPPGSKGDTGEAGCPGAP
GPPGPIGDPGPKGFGPGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEKAHN
QDLGLPGSCLPMFSTLPFAYCNIHQVCHYARRNDRSYWLASAAPLPVMPLSEEEIRPYIS
RCAVCEAPAQVVALHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANEYSFWLTTVRPDLQFSSVPSPDTFKESQAQRQRISRCQ
VCMKYS
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaataaggtgctcattcaggtggatcaagccattagccacagatccctggttg
cttatacttatcctgttttctgtacaacacgtatatgcgagtggaaagaagtttattggg
ccttgcggaggaagagattgctcagtttgccagtgctttcctgaaaaagggtctcggggt
caaccaggactcccagggccacagggtcctattggacccctgggactgccaggacccatt
ggaattccaggagagaaagggatgagaggtgacagcggccctcctggagcagccggtgac
aaaggtgataagggtccaactggtgttcctggatttccaggtttggatggcatacctggg
cacccggggcctcctggacccagaggcaagcctggcatgcatgggtacaatggctcgaga
ggtgatccagggctcccaggagaaagaggagttcctggcccaagaggccccccaggcctt
cctggggaaaatggagaaaaaggaaattctgtgttcattttaggtgccattaaaggaatt
ccgggtgacagaggggacccaggacctcctggcttgccgggatctaggggtgcaagagga
ccagcgggcccaatgggacatccaggagagcctgggttaccaggtgctccgggccatcct
gggagaccaggcttgaagggtaatcctggcgtgggagtgaaggggcaaatgggagaaccg
ggtgaagttggccagcaaggttctcctggacccaccttattgttacagccacctgattct
tgtctgtataaaggagaaaagggcataaaaggaatgcctggtgtaactggacctccagga
ccaccaggacccaagggaaaacctggatttggggccaaaggagagaagggtgttcctggg
ttctcaggaccgcggggtgatcctggttcctatgggttgccaggctttccaggattaaag
ggggaacaaggactgtttggagatcctggatcatttggatttcttggcccaaagggggac
cctggagatcgcgggtacccaggaccacccggtgtgttggtaactccatctcttccgctc
aaaggccctccaggggatccggggcgccctggccgctatggagaaacggggtctgttgga
ccgcctggtccccctggtccctcaggaccaccaggggaaacctgtgcaggcatgatggga
ccccctgggccaggagggtttcctggtcatccgggatttccaggggcagccggtatcccc
gggagagctgattccactccagggaaaccagggagcccgggaccccctgggttgcctgga
gctccaggactgcagggccctccaggatcagatgttatatattgtagtgtcgggcaccct
ggaccacaaggaataaaaggcaaagcaggtcctccaggaagaagaggctcgaaaggagaa
aaaggaaacgcggggctctgtgcctgtgagcctggtcccatgggcccaccaggccctccg
ggacttcctgggaggcagggtagtaagggagacttggggctccctgggtggcttggagag
aaaggtcatccaggccctccgggtgctgaaggatctccaggaccaccaggaaaacccggt
gctgcaggaccacttggcagtaaaggagaaaagggagacatggttgtgtcgagagtgaaa
ggggagaaaggagaaaggggtcctgatgggctcccaggatttccaggacaacagggacaa
catggccgggatggacttcctggangaaagggggatccgggacccccgggggatcatgaa
gacgcagccccaggtgcaaaagggtctcctggattgccggggcccccgggaagaacagga
cctaagggacaaccaggactaggatttcccgggccaccaggagaaagagggccaccagga
gctccaggccgtcccggcgagaggggccttgagggcttgaagggtcagaaaggcgataca
atttcttgtaacgtaacctaccctgggaggccaggacctccaggttttgatggagctcca
ggaccaaagggacttccgggccctccgggcgctccagggttgaggtgtttagatgggcca
aagggtcagcgtggcaaaccaggaatatcagaaatacctggtccacctggttttcgtggt
gacaaaggagatccaggttttggaggtgcaaaggggtcctcccttcctgggcccccaggc
tctcccggttctcgtggagcaaatgggcagaaaggaaccatgggagacactgcctacggc
cacccaggtcccccgggagagagaggtcttgcaggggtgccggggtcaaaaggacacaga
ggtgatccaggacctccaggctttgcagggccggctggtttgcccggattcccaggtctc
aaaggccccagaggcagagagggaagtgctgggtttccagggatcccaggtccacctggc
cgttcctgtgaaagaggcgccccaggaacaccagggcaacccggactccctggggctccg
ggcagtccaggtgccccaggttggaaaggacagcgaggggatgtggggcctcctggtccg
gctggaatgaagggtctccctggagtcccaggacggccaggggtagatggacccccagga
cccccagggctcccaggccccataggcgatgatggactgcctggtcttccaggcccaaag
ggatcccaggggctgcctggcttcccaggttttccaggggagagaggaaagcctggcctg
gaggggcaccctggccgtaaaggagaaccaggagagaggggtcggcctggcttcctcgga
gacaagggggtgaaaggcgccaaaggagcaaggggacccccaggagatgaaggagagatg
gctgtaatttccctaaaggggaaacccggggaacctggacctcctggagatagtggattc
ccaggagcagaaggtgataaaggcaatccggggatgcaggggaggagaggagagccggga
agatacggaccacctggatttcacagaggggagcctggtagaaccgggcacccggggctc
cctggagccccaggccctccaggctcacccgggctgagaggcattattggttttccagga
tttccaggtgaccagggtgaaccaggctctccagggtcccctggaatttcaggaagcgat
ggactgagaggccctaaaggaaacaaaggggaccctgctagtcagtttggcccacctggt
cccgagggagaaccaggtagccctggatgtccaggacatcttggagcacctggagagcgg
ggcttcccgggtgttcaagggcccagaggaccacctggaaggccaggactacctggctcc
tccggaccaccaggctgcccaggtgatccaggagtacctgggctgaagggacatccagga
gacatgggggatcctgggccaagaggcatgatgggggacccggggacaccaggtcttcct
ggaataaaaggtccctccgggtcgcccggtctgaacggcttgcatggtttaaagggtcag
aaaggagccaaaggcgcttcaggttcgcatgaagtgggcccacctggcccaatgggcata
cctgggccgaaaggggagacaggagaccccgggagcccaggaatttctcccccaggcctt
cctggagaaaaaggtccccccggccccccagggagacctggatcacctggtcctgcaggt
gccacaggaagagctcctgaaggtgacattcctgacccaggtccccccggcgatcaggga
cctcccggccccgatggtccaagaggagcacccgggcccccgggcccccctgggagtgtt
gaccttctgaaaggggaaccaggagaccagggtctgccgggtcccccgggcctcccgggc
cccccaggccctccaggacgcaaaggcttcccgggatgtgatggacaagatggccagaaa
ggaccaattggattcccgggactacaggggccacctggacttccgggatctcctggggag
aagggtttacctggctttccaggcaggcaagggccccctgggcctccaggtgccagaggt
gaaccggggccacctgcagacgtggattcctgcccccgaatccccgggcttcctggggtg
ccaggcccaagaggaccagaaggaggcatggggccccccggaatgagaggccccccagga
gcagggtgcaaaggagagtcggggccggatggcaggaggggcaaggatggcctcccaggg
tctcctgggcctcctggaagcaaaggggacacgggagaagcgggctgtcccggagcacca
ggccctcctgggcccattggggatcccgggcccaaagggtttgggcctggatacctcagt
ggcttcctcctggttctccacagtcagacagatggagaacccacctgcccagcgggcatg
cccaggctgtggacgggctacagtctgttgtacctggaaggacaggagaaggctcacaac
caagacctgggtctgccggggtcttgccttcccatgtttagcacactgccctttgcctac
tgtaacatccaccaagtctgccactacgcccggagaaacgaccgatcgtactggctggcc
agcgccgcgcccctgcccgtgatgccgctctcggaagaagagatccgcccgtacatcagc
cgctgtgccgtgtgcgaggccccggctcaggtggtggctctgcacagccaggaccagtcc
atccccccgtgtccacgggcctggaggagcctctggatcgggtactcgttcctgatgcac
acaggggctggggaccaaggaggagggcaggccctcatgtccccgggcagctgcctggaa
gattttcgagccgcgccgttcctcgagtgccaaggccgccagggaacttgccactttttt
gcaaacgagtatagcttctggctgacaacagtgaggcctgacttgcagttttcctcggtg
ccatcaccagacaccttcaaagaaagccaggcccagcggcagagaatcagcagatgccag
gtctgcatgaaatacagctag
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