Panthera leo (lion): 122226954
Help
Entry
122226954 CDS
T10741
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plez03037
]
122226954 (CROCC)
Cilium and associated proteins [BR:
plez03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122226954 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Mis12
Motif
Other DBs
NCBI-GeneID:
122226954
NCBI-ProteinID:
XP_042806925
LinkDB
All DBs
Position
C1:11955457..12001041
Genome browser
AA seq
2092 aa
AA seq
DB search
MDFVSEPCGLVRFSGPPWGLLPGAGGTEACPPVGRFSIVAPRLPSAWGLPEGLTGPHILG
SRTLFLSHPGQGDQGPRSPSHSLSPPPQTLESSVLRAGREKGLSEQDPAQDSQLACLPAR
IREIITRNLSQPENQAPLPAAEMASVLSLQEENQLLQQELSRVEDLLAQSRAERDELAIK
YNAVSERLEQAVRLESGEPETQEPTGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQA
QLVQRLQAKTLQYKKKCSELEQQLLERSTELERQRLRDTEHSHDLESALIRLEEEQQRSS
SLAQVNSMLREQLDQANSANQALSEDIRKVTSDWTRSRKELEQREAAWRREEESFNTYIS
NEHSRLLLLWRQVVGLRRLASEVKMSTERDLLQLGGELARTSRAIQEADLGLSAGLRLAE
SRAEAALEKQTLLQAQLDEQLRDKVLQEKDLAQLQVQSNLDKANLSARVTELALTVERLQ
NQNLEKDRVNKALTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDMESGVQL
SGSERTGDASDGSLRGLSGPRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHK
RQLQVQDMRGRYEASQDLLGTLRKQLSDSEGERRSLEEQLRRLRDKTNGATQAHEDAQRE
AQRLRGTIDLLNRCLRGQREKDSLARSLQAAQQQAEELRQEREKLQAAQEDLRRQRDRLE
EEREDTVRDSERTRRELERSHRQLEQLEMKRSGLAKELVEVREALSCATLQRDMLQAEKA
EVAEALTKAEAGRVELELSMTKLRVEEASLRDSLSKLSALNESLAQDKLGLNRLVAQLEE
EKAALLGRQRQVEQEACLAREAQERLEHLRLEQEVEQQGLEGSLRVAEQAREALEHQLPT
LRQERCRLQEQLAQLSRQLSGREQELEQARRETQRQVEALERAAREKEALAKERAGLAVQ
LAAAERESRTLSEEATRLRLEKEALESSLFEVQRQLAQLEARREQLEADGQALLLAKETL
TGELVGLRQQMTTTEEKVALDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEA
AWRELEAERAQLQGQMHREREELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQAL
SLKESEKTALSEKLMGTQHSLAAVSLDLERHKRDAQSRQEQDRSTVNALTSELRDLRAQL
EEAAAAHAQEAKRLQEQARNLDRQRESSMREAEELRTQLRLLEDARDGLRRELLEAQRKV
RDSQDGREAQRQEASELRRSLGEGVKEREALRRSNEELRAAVKKAESERISLKLANEDRE
QKLVLLAEARVAAGREAEELRAGLQEVERSRLEARRELQELRRQMKVLDGENTRLGRELV
ELWGRLALGERAEKEGRREALGLRQKLLKGEASLEAIRQELQGAQRKLQEQEGEFRARER
GLLASLEEARGAEKLQLDHARSLELKLEAVRAEAAELGLRLSAAEGRAQGLEAELARVEA
QRRAAETQLGGLRSALRRGLGLGRTPSPAPLPSPGSPARGAPAGGSGEGLSSPSPLERSP
GSEPPSPGPATSPASPDLDPEAVRGALREFLQELRSAQRQRDELQAQTGVLSRQLAEMEA
ERDSATSRARQLQKAVADGAEARRRVDGRLSGAQAELVLQEENVRRSERERRAALDQVAA
LERSLQATESELRASQEKISKMKANEVKLESDKRRLKEVLDASESRTIKLELQRRSLEGE
LQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALVKMEESEGAL
RDKAQGLSEALAQSSANLTSTQDKNLHLQKALTACEHDRQVLQERLEAARQALSEARKQS
SSLSEQVQTMRGELADLEVQRAEAEGQLQQLQEVLRQRQEGEAAALHAVQKLQEERRLLQ
ERLDGLQRALAQLEAEKREVERSALRLEKDRVALKRMLDKVEREKLRSHEDTVRLSAEKG
RLDRTLTGAELELAEAQRQIQLLEAQVVALEQDQSPARLEAAEQQQREVEREVERLRSAQ
VQTERTLEARERAHRQRVRGLEEQVSTLKGQLQQELRRSSASFPQTSGPPGE
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgagtgagccatgcggtttggttcgcttctctggccctccatggggcctc
cttcccggggcaggaggcactgaagcgtgccctcccgtggggcgtttttccattgtagct
cccaggcttccctccgcatgggggcttcctgagggtctcacgggcccccacatcttgggc
agcaggactttgttcctctcccatccaggccagggagaccagggcccccggtccccttca
cactctctctctccccctccacagaccctggagagcagcgtcctgagggcaggccgggag
aagggcctgagcgagcaggaccctgcccaggactctcagctcgcctgcctacctgcccgc
atcagggagatcatcacccgcaacctctcccagcctgagaaccaagccccgctgccggcc
gcggagatggcatcagtgctgtcgctgcaggaggaaaaccagctgctgcagcaggagctg
tcccgcgtggaggacctgctggcccagagccgggcggagcgtgacgagctggccatcaag
tacaacgcggtcagcgagaggctggagcaggctgtgcggctggagtctggggagccagaa
acgcaggagcccacggggctggtccggcagagcgtggagctgcggaggcagctgcaggag
gagcaggcctcctaccggcgcaagctgcaggcctaccaggaaggccagcagcggcaggcc
cagcttgtgcagcggctgcaggccaagaccctgcagtacaagaagaagtgctcggagctg
gagcaacagcttctagagagatctacagagctggagcggcagcggctgagggacacagaa
cacagccatgacctcgagagcgccctcatccgcctagaggaggagcagcagaggagttcc
agcctggcccaggtgaactccatgctccgagagcagctggaccaggcgaactcggccaac
caggctctgagtgaggacatccgcaaggtgacttctgactggacacgcagccgtaaggag
ctggagcagcgggaggcggcgtggaggcgtgaggaggagtccttcaacacctacatcagc
aacgagcacagccgcctgctcctcctctggaggcaggttgtggggctccgtcggctggcc
agcgaggtgaagatgtccaccgagagggacctgctgcagctgggaggggagctggcccgg
acctcaagggccatccaggaggcggacctggggctgagcgcaggcctgcggctggccgag
agccgggcagaggcggccctggagaagcagacactgctacaggcccagctggacgagcag
ctgcgggacaaggtgctccaggagaaggacctcgcccagctgcaggtgcagagcaacctg
gacaaggccaacctcagtgccagagtgacagagctggccctgacagtggagcgccttcag
aaccagaatctggagaaggatcgggtcaacaaggcccttactgagaagcttgaggccttg
gaatccctgcggctccaggagcaggcggccctggagacagaggacggagaggggctgcag
cagaccctgagagacctggcacaggccgtcctgtcggacatggagagcggtgtccagcta
agtggctctgagcgcacgggggacgcttcggacggcagcctgcgggggctctcgggcccc
cggaccccctccccgccgcgacgctcctcgcccggccgcggccgatccccgcgccgaggc
ccatccccggcctgctccgactcctccacgctcgccctgatccactcggccctgcacaag
cgccagctgcaggtccaggacatgcgtgggcgctatgaggccagccaggacctcctgggc
accctgcggaagcagcttagtgacagcgagggtgagcgccgcagcctagaggaacagctg
cggcgtcttcgggacaagaccaacggggccacccaggctcatgaggatgcgcagcgtgag
gcccagcgtctgcggggcaccattgaccttctgaacaggtgcctgagaggtcagagggag
aaggacagcctggcccgcagcctgcaggcggcccagcagcaggccgaggagctacggcag
gagcgagagaagctgcaggcggcccaggaggacctgcggcgccagcgggaccggctggag
gaagagcgggaggacacggtgcgggacagcgagcggactcgcagggagctcgagcgcagc
cacagacagctagagcagctggaaatgaagcgctcagggctggcgaaggagctggtggaa
gtgagggaggcgctgagctgtgccacgctgcagagggacatgctacaggccgagaaggcc
gaggtggctgaggcgctgaccaaggctgaggccggccgtgtggagctcgaactctcaatg
accaagctgagggtcgaggaggcctctctgcgggactccttgtccaagctgagcgccctc
aacgagagcctcgcccaggacaagctgggtctgaaccgcctcgtcgcccagctggaagag
gaaaaggcggccctactgggccggcaacggcaggtggagcaggaggcctgcttggcacgg
gaggcgcaggaacggctggagcacctacggttggagcaggaggtggaacagcagggcctg
gagggctccctgcgggtggccgagcaggcccgggaggccctggagcaccagctccccacg
ttgcgccaggagcgctgccggctgcaggagcagctggcccagctctcccggcagctgagc
gggcgcgagcaggagctggaacaggcacggagggagacgcagcggcaggtagaggcgctg
gagcgggcagcccgggagaaggaggctctggccaaagagcgggccggcctggcggtgcag
ctggccgcagctgagcgagaaagccggaccctgtcggaggaggccacacgcttgcgcctg
gagaaggaagccctggagagtagcctgttcgaggtgcagcggcagttggcgcagctcgag
gcccgccgggagcagctggaagccgacgggcaggccctgctgctggccaaggagaccctg
actggggagctggtgggcctacggcaacagatgacaactacagaggagaaggtggctctg
gacaaggagctgatggcccagaagctggtgcaggctgagcgggaagcccaggcctctctg
cgggagcagcgggccgcccatgaggaggacttgcaacgactccagcgagagaaggaggca
gcgtggcgggagctggaggccgagcgggcccagctgcagggtcagatgcaccgggagcga
gaggagctgttggcacggctggaggcagagaaggaagagctgagcgaggagatcgccgcc
ctgcagcaggagcgtgacgagggcctcctcctggccgagagcgagaagcagcaggccctg
tccctgaaggagtccgagaagacggcgttgtcagagaagctgatgggtacacagcacagc
ctggccgccgtctccctggatttggagcggcacaagagagacgcccagagccggcaggag
caggaccggagcactgtgaacgcgctgacgtccgagctgcgggacctacgggcccagctt
gaggaggctgccgcagcccacgcccaggaggccaagaggctgcaagaacaggcccgaaac
ctggacaggcagcgggagtcctccatgcgcgaggcagaagagcttcggacgcagctgcgc
ctgctggaggacgcccgtgacgggttgcggcgggagctgctcgaggcccagcgcaaggtg
cgcgacagtcaggatggccgtgaggcccagcgccaggaggccagcgagctgcggcgcagc
ctgggtgagggcgtcaaggagcgcgaggccctgcggcgttccaacgaggagctgcgggcg
gccgtgaagaaggctgagagcgaacggatcagcttgaagcttgccaacgaggacagggag
cagaagctggtgctcctcgcggaggcccgggtggccgcgggcagggaggccgaggagctg
cgggccggactgcaggaggtggagcgctcgcggctggaagcccgccgggagctgcaggag
ctccggcggcagatgaaggtgctggacggtgagaacaccaggctgggccgggagctggtg
gagctgtggggccgcctggccctgggcgagcgggcagaaaaggagggccggcgggaggcc
ctgggcctccgacagaagctgctgaagggcgaggccagcctggaggccattcggcaggag
ctccagggagcccagaggaagctgcaggaacaggagggcgagttcagggcccgcgagcga
ggcctgctggcctccctggaggaggcacgcggcgccgagaagctgcagctggaccacgcc
cgcagcttggagctgaagctggaggcggtgcgggccgaagccgcggagctggggctgcgg
ctgagcgcggccgagggccgggcgcaaggcctggaggccgagctggcccgcgtggaggcg
cagcggcgcgcagccgagacccagctgggcggcctgcgctcagctctgcgtcggggcctg
ggcctcgggcgcactcccagcccggccccgctgccctcgccgggctcgccggcccggggc
gcgcccgctggaggaagcggcgaagggctcagcagccccagccccttggaacgcagccct
gggtccgagccaccatccccaggacctgccacctccccggcatccccagacctggacccg
gaggcggtacggggggccctccgggagttcctgcaggagctgcggagtgcccagaggcaa
cgggatgagcttcaggcccagaccggtgtcctgagtcgacagctggctgagatggaggct
gagagggacagtgccacctcacgggcgaggcagctgcagaaggctgtggccgacggtgca
gaagcccgacgccgcgtggacgggcggctgagcggggcccaggcagagctggtgctgcag
gaggagaatgtgcggcgcagcgagcgggagcgccgggccgccctggaccaggtggccgcc
ctggagaggagcctgcaggccaccgagagtgagctccgggccagccaggagaagatcagc
aagatgaaggccaatgaggtgaagctggagagtgacaagcggcgtctgaaggaggtgttg
gatgcctctgagagccgcaccatcaagcttgagctgcagcggcgctcactcgagggggaa
ctgcagcgcagccgcctgggcctcagtgaccgtgaggcccaggcccaggccctccaggat
cgggtggactccctgcagagacaggtggcagacagtgaggtgaaggcggggactctgcag
ctgacagtggagcggctgaacggggccctggtcaagatggaagagagcgagggggccttg
cgggacaaggcgcagggcctgtcagaagcactggcccagagtagcgccaacctgaccagc
acccaggacaagaatctgcatctgcagaaggccctgaccgcttgtgaacatgaccgccaa
gttctccaagaacggctggaggccgctcggcaggcgttatcggaggcccggaagcagagc
agctccctgagtgagcaggtgcagacgatgcgaggcgagctggcggacctggaggtgcag
cgggcagaggcagagggccagctgcaacagcttcaggaggtgctgcggcagcgacaggag
ggggaggcggcggccctgcacgcggtccagaagctgcaggaggagcggcggctgctccag
gagcgcctggacggcctgcagcgggccctcgctcagctggaggccgagaagcgggaggtg
gagcggtcagcgctgcggctggagaaggaccgggtggccctcaagaggatgctggacaag
gtggagcgcgagaagcttcgcagccatgaggacacggtgcggctgagcgccgagaagggc
cgcctggaccgcacgctcacgggggccgagctggagctggctgaggcccagaggcagatc
cagctgctggaggcccaggtggtggcactggagcaggaccagagcccagcccggctggag
gccgcggagcagcagcagcgggaggtagagcgggaggtggagcgcctgcgcagcgcccag
gtgcagacagagcgcaccctggaggctcgggagcgggcccaccggcagcgcgtgcgcggg
ctggaagagcaggtgtccacactgaagggacagttgcagcaggagctccggaggagctca
gcatccttcccccaaacctccggccccccaggggaatga
DBGET
integrated database retrieval system