Panthera leo (lion): 122227973
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Entry
122227973 CDS
T10741
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
plez Panthera leo (lion)
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plez03036
]
122227973 (CHD5)
Chromosome and associated proteins [BR:
plez03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122227973 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122227973
NCBI-ProteinID:
XP_042808698
LinkDB
All DBs
Position
C1:complement(3932556..3992017)
Genome browser
AA seq
1948 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGLGGFDDCFPEEPVGLPKKKKSKKLKENRS
KGKRKKKEGSNDELTENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDED
DNDDGCLKEPKSSGQLMAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIRK
AKTKEGKGPGVRKKIKASKDSKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDF
DSASIHSSSVRSEGSAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDTC
PRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEDDEEEGGCEEEEDDHMEFCRV
CKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPP
APFMVGLPGPDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKPKEDKQKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDT
ILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYT
GDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEW
ACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNL
EGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYK
FILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVK
SSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQE
AIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK
KVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELF
KDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGM
PPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPA
PLGLPDKMEAQLGYMDEKELGVQKPKKPPEIQALPTALDRVEGEDKHENSDGQERLEDTE
KAPPSPEQPPKEEVLPEKEKILDKLELSLIHSRGDGNDFRPDDTKVEEKEPIETQQNGDK
EEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLA
GIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQL
RRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEE
LLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTTQQGAFGNSQMYNNN
FGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtcttgggggcttcgatgactgcttccct
gaggagcctgtgggccttcccaagaagaagaaatccaagaagctcaaggagaacaggtcc
aaagggaaacggaagaagaaggaggggagcaatgacgagctgacggaaaatgaagaagac
ctggaagagaagtcggagagtgagggcagtgactactcccctaataagaagaagaaaaag
aaactcaaggacaagaaggagaaaaaagccaagcgaaagaggaaagatgatgacgaggat
gataacgatgacgggtgcctgaaggagcccaagtcctcggggcagctcatggccgagtgg
ggcctggacgatgtggagtacctgttctcagaggccgactaccacacactgaccaactac
aaggccttcagtcagttcctcaggccgctcattgccaagaagaacccgaagatccccatg
tccaaaatgatgaccgtcctgggtgccaagtggcgggaattcagcgccaacaaccctttc
aagggcagctcggcagcggctgccgcggcagcagtggccgcggccgtggagacagtcacc
atcgcccctccgctggctgtcagcccccagcaggcaccccagcctgtacctatccgcaag
gccaagaccaaggagggcaaggggccaggagtgaggaagaagatcaaagcgtccaaggac
tcgaagaaaaagggcaaagggagaaaggtagccgggctcaagttccgctttggagggatc
agcaacaagaggaagaaaggctcctcgagcgaggaagatgagcgggaggagtcggacttc
gacagcgccagcatccacagctcctccgtgcgctccgagggctcggcagccctggggaag
aaaagcaagaggcggcgcaagaagaggaggattgacgatggtgatggctatgagacggac
caccaggactactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgc
ccgcgggcctaccacctagtctgcctcgacccagagctggagaaggctccggagggcaag
tggagctgtcctcactgtgaaaaggaggggatccagtgggagccgaaggacgacgaggac
gacgaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgcgtg
tgcaaagacggcggcgaactgctctgctgcgacgcctgcccgtcctcctaccacctgcat
tgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgtact
tgtcccccactgaagggcaaagtccagcggatcctgcactggaggtggacggagcccccg
gctcccttcatggtggggctgccggggcccgacgtggagcccggtgtccccccaccgaag
cccctggagggcattccggagagggagttctttgtcaagtgggctggactctcctactgg
cactgctcctgggtgaaggagctacagcagctggagctgtaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggatgagccgccgccctttgactacggctctggcgac
gaggacggcaaaagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgtatcctgaaccac
agcttcgacaaaaagggggacgtgcactacctgatcaagtggaaagacctgccctatgac
cagtgcacctgggagatcgacgacatcgacatcccctactacgacaacctgaagcaggcc
tactggggtcacagggagctgatgctgggtgaggatgccaggctgcccaagaggctggtc
aagaagggcaagaagccaaaggaggataaacagaagccgccagacacacccatcgtggac
cccacggtcaagtttgacaagcagccttggtacattgactccacgggtggcacactgcac
ccgtaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacagacacc
atcctggccgacgagatgggcttgggcaagactgtgcagaccatcgtcttcctctactcc
ctgtacaaggaggggcactccaaggggccctacctggtcagcgcgcccctgtccaccatc
atcaactgggagcgggagtttgagatgtgggcgcccgacttctacgtggtcacctacacg
ggggacaaagagagccgctccgtgatccgggagaatgagttttctttcgaggacaacgcc
attcggagtggaaagaaggtgttccgcatgaagaaagaagtgcagatcaaattccacgtc
ctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctctatcgagtgg
gcctgccttgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttcagg
gtcttgaacagctacaagatcgattacaagctgctgctgacggggaccccgcttcagaac
aacctggaggagcttttccacctcctcaacttcctgactccagagaggttcaacaatctg
gagggcttcctggaggagtttgccgatatctccaaggaagaccagatcaaaaagctccat
gacctgctggggccgcacatgctgaggcggctcaaggccgatgtgttcaagaacatgccg
gccaagaccgagctgatcgttcgcgtggagctgagccagatgcagaagaagtactacaag
ttcatcctcacgcggaacttcgaggcactgaactccaaggggggcgggaaccaggtgtcg
ctgctcaacatcatgatggacctgaagaagtgttgcaaccacccctacctcttccccgtg
gctgccgtggaggcccccgtcttgcccaatggctcctatgacggcagctccctggtcaag
tcctcgggcaagctcatgctgctacagaagatgctcaagaaactgagggatgaagggcac
cgcgtgctcattttctcccagatgacgaagatgttggaccttctggaggacttcctggag
tatgagggctacaagtatgagcggattgatggtggcatcactgggggcctccgacaagag
gcgatcgacagattcaacgcccccggggcccagcagttctgcttcctcctctcgacccgg
gcgggtggcctgggcatcaacctggctacagcagacacggtcatcatctacgactcggac
tggaatccacacaacgacatccaggccttcagccgcgcccaccgcatcggacagaacaag
aaggtaatgatctaccgctttgtgactcgggcctcggtggaggagcgcatcacgcaggtg
gccaagcgcaagatgatgctcacccacctggtggtgcggcctggcctcggctccaagtct
ggctccatgaccaagcaggagctggacgacatcctcaagttcggcaccgaggagctcttc
aaggacgacgtggagggcatgatgtctcagggccagaggcctgtcacgcccatcccggat
gtccagtcctctaaagggggagccctggctgccagcgccaagaaaaagcatggcagtacc
ccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcggcc
atctccaagctgctggacagaaaccaggacgccacggacgacacggagctgcagaatatg
aacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggatggcgtg
gaggaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgactactgggag
aagctgcttcggcaccactacgagcagcagcaggaggacctggcccgcaatctgggcaaa
ggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggagtgg
caggacgagctctccgataaccagtccgaatattccatcggctccgaggacgaggacgag
gactttgaggaaaggccagaagggcagagtggacggcgacaatccaggaggcagctgaaa
agcgacagggacaagcccctgccacctcttctcgcccgtgtgggtggcaatatcgaggtg
ctgggcttcaacgcccggcagcggaaggcctttctgaacgccatcatgcgctggggcatg
cccccccaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagcgag
aaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggctgac
ggtgcagagaccttcgcggacggcgtgccccgtgagggcctctcgaggcagcacgtgctt
acccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgaacacgttaac
gggaagtacagcaccccggacttgatccccgaggggcccgagggcaagaagccaagcgaa
gtcatctcctcggaccccaacacgccagtgcccgccagccctgcccacctcctgccggcc
ccactgggcttgccagacaaaatggaagcccagctgggctacatggatgagaaggagctg
ggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggacaga
gtggagggtgaggacaagcatgagaactcagatggccaggagcgactggaggacacagag
aaggccccgccgtccccagagcagccgccaaaagaagaagtgcttcctgagaaggagaaa
attctggacaagctggagctaagcttgattcacagcagaggggatggcaacgatttcagg
ccagacgacaccaaagtggaggagaaggagcccattgaaacacagcaaaatggtgacaaa
gaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaattcatgttcaac
attgcagatgggggcttcacagagctgcacacgttgtggcagaatgaggaacgtgctgct
gtgtcctcggggaaaatctacgacatctggcaccggcgtcatgactactggctgctggcg
ggcatcgtgacgcacggctatgcccgctggcaggacatccagaatgacccgaggtacatg
atcctcaacgagcccttcaagtctgagatccacaagggcaactatctggagatgaagaac
aagttcctggcccgcaggttcaagctgctggagcaggccctggtcatcgaggagcagctc
cggagggccgcgtaccttaacatgacccaggaccccaaccacccagccatggccctcaac
gcccgcctggccgaggtggagtgccttgctgagagccaccagcacctgtccaaggagtcc
cttgccgggaacaagccagccaatgctgtcctgcacaaggtcctgaaccagctggaggag
ctgctgagcgatatgaaggcggacgtgacgcgcctgccctccatgctgtcgcgcatcccc
cccgtggctgcccgcctccagatgtcagagcgcagcatcctgagccgcctgaccaaccga
gctggtgaccccaccactcagcagggcgctttcggcaactcccagatgtacaacaacaac
tttgggcccaacttccggggccctggaccgggagggattgtcaactacaaccagatgccc
ctggggccctatgtgaccgatatctag
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integrated database retrieval system
