Panthera leo (lion): 122228150
Help
Entry
122228150 CDS
T10741
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
plez Panthera leo (lion)
Pathway
plez04064
NF-kappa B signaling pathway
plez04514
Cell adhesion molecules
plez04668
TNF signaling pathway
plez04670
Leukocyte transendothelial migration
plez04933
AGE-RAGE signaling pathway in diabetic complications
plez05143
African trypanosomiasis
plez05144
Malaria
plez05417
Lipid and atherosclerosis
plez05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122228150 (VCAM1)
04668 TNF signaling pathway
122228150 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122228150 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
122228150 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
122228150 (VCAM1)
05143 African trypanosomiasis
122228150 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122228150 (VCAM1)
05418 Fluid shear stress and atherosclerosis
122228150 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122228150 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plez04515
]
122228150 (VCAM1)
04090 CD molecules [BR:
plez04090
]
122228150 (VCAM1)
04091 Lectins [BR:
plez04091
]
122228150 (VCAM1)
Cell adhesion molecules [BR:
plez04515
]
Immunoglobulin superfamily
VCAM
122228150 (VCAM1)
CD molecules [BR:
plez04090
]
Proteins
122228150 (VCAM1)
Lectins [BR:
plez04091
]
I-type lectins (Siglecs)
122228150 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
ICAM_N
Ig_4
Ig_6
Ig_5
ICAM1_3_5_D2
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
122228150
NCBI-ProteinID:
XP_042809002
LinkDB
All DBs
Position
C1:85529203..85547199
Genome browser
AA seq
748 aa
AA seq
DB search
MFSSQRQLKMPRKMFVIFGASNILCMVFTISQAFKIETFPENKIVAQIGDVVSLTCRTTG
CEPPSFSWRTHLDSPLNGQVRNEGSNSTLTMDPVGFRNEYSYLCTAICGSEKREKGIQVE
IYSFPKDPEIRLSGPLEVGKPVTVTCLVPDVYPFDRLEMNLLKGNHLLQNKDFVEPMERK
SLETKSLEVTFTPTNEDIGKALVCQAKLHIDEIDFKPKERETTKKLQVYISPKNTVISVN
PSTRLQEGGSVTMTCSSEGLPAPQIFWSKKLDNGNLQLLSGNSTLTLIAMRTEDSGIYVC
EGVNQVGKNGKEVELIVQEKPFTVEISPGPQIVAQIGDSVVLTCGVTGCESPSFTWRTQV
DSPLSGKVKTEGSKSTLTLSPVGFENEHSYLCTVTCGRKKVEKGIKVDLYSFPRDPEIEM
SGLPVNGNPVTVSCRVPNVYPSDRLEIELLKGESIIGNKNFLENIDKKYLETESLDMTFI
PTTEDTGTVLVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVN
MTCSSNGLPAPKILWSRQLNNGHLQPLSENSTLTLTSTKMEDSGVYVCEGINQAGIDRKE
VELIIQVAPKDIQLTAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLQSRDG
AYTIHKVQLEDAGVYECESKNEVGLQLRSLTLDVKGRGNYQDYFSPELLVLYCSSSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacagcgacaactaaaaatgcctaggaagatgtttgtgatctttggagct
tcaaatatactttgcatggtgtttacaatttctcaagcttttaaaatagagaccttccct
gaaaacaaaattgttgctcagattggtgatgtcgtttcactgacttgcaggacaacaggc
tgtgagcccccatctttctcttggagaacccatttagatagtccactgaatgggcaggtg
agaaatgaggggtccaattccacgctgaccatggatcccgttggtttcaggaatgaatac
tcttacctgtgcacagcgatttgcggatctgagaaacgggaaaaagggattcaggtggag
atttactctttccctaaggacccagagatccgtctgagtggccccctggaagttgggaag
ccagtcacagtcacatgcttggtccctgatgtttatccatttgacaggctggagatgaat
ttgctgaaaggcaaccatctcttacagaataaggactttgtagaacctatggaaagaaag
tccctggaaaccaagagtttggaggtaaccttcactcctaccaatgaagatattgggaaa
gctcttgtttgccaagcaaaattacacattgatgaaattgactttaagcccaaagaaagg
gagactacgaaaaaactgcaagtctacatctcacccaagaacacagttatctctgtgaat
ccctccacaaggctgcaggaaggtggttctgtgacaatgacatgctccagtgaaggtcta
ccagctccacagattttctggagcaaaaaattagataatgggaatctacagctcctttct
gggaactcaactctcactttaattgctatgaggacagaagattctggaatttatgtgtgt
gaaggagtcaatcaagttgggaaaaatggaaaagaggtggaattaattgttcaagagaaa
ccattcactgttgagatctcccccgggccccagattgttgctcagattggtgactcagtt
gtgttgacatgtggtgtcacaggctgtgagtccccatctttcacttggagaacccaggta
gacagccctctgagtgggaaggtgaagactgaagggagcaagtccacgctgaccctgagc
cctgtgggttttgagaatgaacattcttatctgtgcaccgtaacctgtggccgtaagaaa
gtggaaaagggaattaaagtggacctctactcattccctagagatccagagattgagatg
agtggtctgccagtgaatggaaacccagtgactgtaagctgccgggttcctaatgtgtat
ccttctgaccggctggagattgaattacttaagggggagagtattatagggaataaaaat
tttctggagaacatcgacaagaagtatctagagactgagagtttggacatgaccttcatc
cccaccactgaagatactggaacagttcttgtttgtctggctaagttacatattgatgaa
atggaatttgaacccaaacaaaggcagagtacacagacactttatgttaatgttgccccc
agggatacaaccatcttggtcagcccctcctccatcctggaggaaggtagttctgtgaat
atgacatgctccagcaatggccttccagctccaaaaatcctctggagcaggcagctaaac
aatgggcatctacagcctctttctgaaaattcaaccctcaccttaacttctacaaaaatg
gaagactctggtgtttatgtgtgtgaagggattaaccaggctggaatagacagaaaagaa
gtcgaattaattatccaagttgctccgaaagacatacaacttacagcttttccttctgag
agtgtcaaggaaggagacactgttattatctcctgtacatgtggaaatgttcccaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctacagtccagagatggt
gcatataccatccacaaggtccagttagaggacgctggagtgtacgaatgtgaatctaaa
aatgaggttggcttgcaattaagaagtttaacccttgatgttaaaggaagaggaaattac
caggactatttttctcctgaacttctcgtgctctattgttcatcttccttaataatacca
gccattggaatgatcatttactttgctagaagagccaacatgaaagggtcatacagtctt
gtagaagcacagaaatcaaaggtgtag
DBGET
integrated database retrieval system
