Panthera leo (lion): 122229741
Help
Entry
122229741 CDS
T10741
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
plez Panthera leo (lion)
Pathway
plez04360
Axon guidance
plez04724
Glutamatergic synapse
plez04726
Serotonergic synapse
plez04929
GnRH secretion
plez04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
plez00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122229741 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
122229741 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
122229741 (TRPC1)
04726 Serotonergic synapse
122229741 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
122229741 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plez04040
]
122229741 (TRPC1)
Ion channels [BR:
plez04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122229741 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
122229741
NCBI-ProteinID:
XP_042811095
LinkDB
All DBs
Position
C2:complement(120596401..120661121)
Genome browser
AA seq
752 aa
AA seq
DB search
MKKRIHPPALGDYREACDYYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQ
LLLDYGCQSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVA
PVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLA
SPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRE
LEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSG
YRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLL
NLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFV
MNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSS
ILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSN
DTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLL
VAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKW
ICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENL
NELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagaatccatccaccagcactgggagactacagagaagcttgtgactattat
atggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgcgtagat
gtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatatactacag
cttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgactctgaa
gtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaagaccaact
atagtaaaactaatggagcgaattcagaatcctgagtattcaacaactatggatgttgca
cctgtcattttagctgctcatcgtaacaactatgaaattcttacaatgctgttaaaacag
gatgtatctctacccaagccccatgcagttggctgtgaatgcacattgtgctctgcaaaa
aacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgtttggcc
agtccagctctaataatgttaacagaggaggatccaattctgagagcatttgaacttagt
gctgatttaaaagaattaagccttgtggaggtggaattcaggaatgattatgaggaatta
gcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattcacgagaa
ttggaagttatcctaaaccatacatctagtgatgaacctcttgacaaacggggattacta
gaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaaaaggagttt
gtctcccagtctaactgccagcagttcctgaacactgtttggtttggacagatgtcaggc
taccgacgtaagcccacctgtaagaagataatgactgttttgacagttggtatcttttgg
ccagttttgtcactttgttatttgatagctcccaaatctcagtttggcagaatcattcac
actccttttatgaaatttattattcatggagcatcgtatttcacattcctgctgttacta
aacctatattctcttgtctacaatgaggataagaaaaacacaatggggccagcccttgaa
agaatagactatcttcttatactgtggattattgggatgatttggtcagacattaaaaga
ctctggtatgaagggttggaagactttttagaagaatcccgtaatcaactcagttttgtc
atgaattcactttatttggcaacttttgccctcaaagtggttgctcacaacaagtttcat
gattttgctgatcggaaggactgggatgcattccatcctactctggtggcagaagggctt
tttgcatttgcaaatgttctaagttatcttcgtctcttttttatgtatacaacaagctcc
atattgggtccattacagatttcaatgggacagatgttacaagattttggaaaatttctt
gggatgttccttcttgttttgttttctttcacaattggactgacacaactgtatgataaa
ggctataccccaaaagaacagaaggactgtgtgggcatcttctgtgaacagcaaagtaat
gataccttccattcgttcattggcacttgctttgctttgttctggtatattttctcctta
gcacatgtggcaatctttgtcacaagatttagttatggagaagaattgcagtcctttgtt
ggagctgttattgttgggacatacaatgtcgtggttgtgatcgtgcttaccaagctgctg
gtggcaatgcttcataaaagctttcagttgatagcaaatcatgaagacaaggaatggaag
tttgctcgagcaaagttgtggcttagctactttgatgacaaatgtacgttacccccacct
ttcaatatcattccttcaccaaagactatttgctatatgattagtagcctcagtaagtgg
atttgctctcatacatcaaaaggcaaggttaaacggcaaaacagtttaaaggaatggaga
aatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgcctagtgcatcgt
tacttgacatccatgagacagaagatgcaaagtacagatcaggcaaccgtggaaaatcta
aatgaactacgccaagatctttcaaaattccgaaatgaaataagggatttacttggcttt
cggacttctaaatatgctatgttttacccaagaaattaa
DBGET
integrated database retrieval system
