Pantoea ananatis LMG 5342: PANA5342_0074
Help
Entry
PANA5342_0074 CDS
T01728
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_0074 (gidA)
03036 Chromosome and associated proteins [BR:
plf03036
]
PANA5342_0074 (gidA)
Transfer RNA biogenesis [BR:
plf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PANA5342_0074 (gidA)
Prokaryotic type
PANA5342_0074 (gidA)
Chromosome and associated proteins [BR:
plf03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PANA5342_0074 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
AlaDh_PNT_C
HI0933_like
Pyr_redox_2
DAO
MarR_2
Pyr_redox
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
CCF07467
LinkDB
All DBs
Position
complement(75484..77373)
Genome browser
AA seq
629 aa
AA seq
DB search
MFYQDPFDVIVIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDALGGLMAGAIDRAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI
FQQAVDDLIVENDRVVGAVTQMGLKFRAKTVVLTVGTFLDGKIHIGLDNYSGGRAGDPPS
IPLAKRLRALPLRVDRLKTGTPPRIDARSIDFSVLAPQHGDNPMPVFSFMGNAGQHPQQV
PCWMTYTNEKTHDVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADRNSHQIFLEPE
GLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKLTLESK
FIDGLFFAGQINGTTGYEEAAAQGLLAGLNAARQSADKEGWAPRRDQAYLGVLVDDLCTL
GTKEPYRMFTSRAEYRLMLREDNADLRLTETGRELGLVDDARWARFNQKLEAIEQERQRL
RDIWVHPKSEHVEAVNTITSSPLTKEASAEDLLRRPEMTYLKLMALDAFGPALADEQAAE
QVEIQVKYEGYIARQQEEIDRQLRNENTLLPATLDYRQVSGLSNEVIAKLNDHKPVSIGQ
ASRISGVTPAAISILLIYLKKQGLLRKSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcaagatccttttgacgtcatcgttattggtggtggtcatgcgggcacggaa
gctgccatggcagcagcccgaatgggtcagcaaaccctgttactgacccataacatcgat
acgctgggacaaatgtcctgcaacccggccatcggtggcatcggtaagggacatttggta
aaggaagtggatgccttaggcggtttgatggccggtgcaatcgatcgggcgggtattcag
tttaggatactaaacgcaagtaaaggccctgccgtaagggcgacccgtgctcaggcggac
cgcgtactctatcgtcaggcggtacgtactgcgctggagaaccagccaaacctgatgatc
ttccagcaggccgttgacgatcttatcgtcgagaacgatcgcgttgtcggtgcggtaacc
caaatgggcctgaaattccgtgccaaaacggtcgtgcttaccgtgggtaccttcctcgac
ggaaaaattcatatcgggctggataactacagcggaggtcgtgcaggcgatccgccgtcg
atccctctggcaaaacgcctgcgtgctttgccactgcgcgttgaccgcctgaaaaccggt
acaccgccacgcattgatgcacgcagcatcgattttagcgtacttgccccgcagcatggc
gataacccgatgccggtgttctctttcatgggcaatgccggacagcacccacagcaggtg
ccgtgctggatgacctataccaatgaaaaaacacatgatgtgatccgtaataacctcgat
cgtagccccatgtatgccgggatcatcgaagggatcgggccacgttattgtccgtcgatc
gaagacaaagtcatgcgcttcgccgatcgcaactcgcatcagatcttccttgagcctgaa
ggactgaccagcaatgagatctaccccaacggtatctcaaccagcctgccattcgacgta
cagatgcagatcgttcgttcaatgcagggcatggaaaatgcgaagatcgtgcgcccgggt
tatgccattgagtatgacttctttgatccacgtgatttaaaactcacgctggaaagcaaa
tttatcgacggcctgttttttgccggtcagattaacggcaccacaggctacgaagaagcg
gcagcacagggattgctggcggggcttaacgccgcgcgtcagtctgctgacaaagagggc
tgggcaccgcgtcgcgatcaggcttacctcggggtactggtcgacgatctttgcactctc
ggcactaaagaaccttaccgcatgtttacctcacgtgccgaatatcgcctgatgctgcgt
gaagacaatgcagatttacgtttaacggaaaccgggcgtgaactcggcctggtggatgat
gcgcgctgggcgcgcttcaaccagaagcttgaagcgatcgagcaggaacgccagcgactg
cgcgatatctgggtgcaccctaagtccgaacatgttgaggcggtgaataccatcaccagc
tctccattgacgaaggaagccagtgctgaagatctgttacgccgccctgaaatgacctat
ctgaagctgatggcacttgatgcttttggcccggctttggcggatgaacaggctgctgaa
caggttgagatccaggtaaaatacgaaggctatattgcgcgtcagcaggaagagatcgat
cgtcagttgcgtaatgagaatacgctgctgccagccacgcttgattatcgtcaggtcagt
ggcctttctaatgaagttatcgccaagcttaacgatcataaaccggtttcaatcggccag
gcatcacgcatctcaggcgtcacgcctgcggccatctcaattttactgatttacctgaaa
aaacaaggtctgctgcgcaaaagcgcctga
DBGET
integrated database retrieval system