Pantoea ananatis LMG 5342: PANA5342_0096
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Entry
PANA5342_0096 CDS
T01728
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf03030
DNA replication
plf03410
Base excision repair
plf03420
Nucleotide excision repair
plf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PANA5342_0096 (polA)
03410 Base excision repair
PANA5342_0096 (polA)
03420 Nucleotide excision repair
PANA5342_0096 (polA)
03440 Homologous recombination
PANA5342_0096 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plf03032
]
PANA5342_0096 (polA)
03400 DNA repair and recombination proteins [BR:
plf03400
]
PANA5342_0096 (polA)
Enzymes [BR:
plf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PANA5342_0096 (polA)
DNA replication proteins [BR:
plf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PANA5342_0096 (polA)
DNA repair and recombination proteins [BR:
plf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PANA5342_0096 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PANA5342_0096 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCF07489
LinkDB
All DBs
Position
105741..108527
Genome browser
AA seq
928 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLVQYSPTHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIEPLHEMVRAMGLPLLAVSGVEADDVIGT
LALEAEKKGHAVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVEQKYGVPPSLIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLDKVADLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVELDQPCEALTVSEPDVNALQALFSRFEFKRWLTDLQEGKWLQGT
KSNRQAQQVLTDEPVASVEATSLLSADGYITILDQQTLDAWVEKLKNSEVFAFDLETDGL
DTLTANIVGLSFAVAPGEAAYLPVAHDYLDAPEQLDRDAVLAQLKPLLEDPDASKVGQNL
KYDRGVLKNYDIELAGIKYDTMLESYILNSVVGKHDMDSLSARWLNHKTITFEEIAGKGK
NQLTFNQIALEQAAHYAAEDADVTLQLHLKMWPELEKEAGPKKVFEQIEMPLLKVISRVE
RNGVLIDQAILAQHSKELTSRLAELELKAHELAGEPFNLSSTKQLQVILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPVSGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFVAGKGNRIVAADYSQIELRIMAHLSQDK
GLLDAFSQGEDIHRATASEVFGVPLSKVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLRYMENTRQLAASNGYVETLDGRRLWLPDIKSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIAVDDWLQKQTDDAVRMIMQVHDELVFEIKAEAVDEASKQI
RALMEGSMALDVPLLVEVGVGDNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatagcagaaaaccccctgattttggttgatggctcatcctatctttatcgc
gcgtaccacgctttcccgccgctaaccaacagcgcaggtgagcctactggtgctatgtat
ggcgtgctcaacatgctgaaaagcctgttggtacagtacagccctacacatgttgctgtg
gtgtttgatgctaaaggcaaaaccttcagggatgaactgtttgaacattacaaatcccac
cgcccaccgatgcctgatgatttgcggtcacaaatagagccgctgcacgaaatggtgcgt
gcgatgggcttgccgctgttggctgtcagcggcgttgaagcggacgatgtgattggtacg
ctggcgttagaggcagagaaaaaaggccacgctgttctgatcagcaccggcgataaagat
atggcgcagcttgtcacaccgggcattacgctaatcaataccatgacgaataccattctt
ggcccagaagaggttgagcagaagtatggtgtgccaccgtcgttgatcatcgattttctg
gcgatgatgggggacagctcagataatattcccggcgtacccggcgtgggtgaaaaaaca
gcccaggcgctgctgcaggggctgggcgggatgcagtccatttacgacaatcttgataaa
gtcgccgatctctcttttcgcggtgcaaaaaccatggccgcgaaactggagcagaatcgc
gatgttgcttttctttcttatcagcttgccaccattaaaacagacgtcgagctcgatcaa
ccctgtgaagcgcttacggtcagcgaacctgatgttaacgcgctgcaagcgctatttagc
cgtttcgaattcaagcgctggttgaccgacctgcaagagggaaaatggctgcagggtact
aaaagcaaccggcaagcccagcaggttcttaccgatgagccggtggcgagcgttgaggcc
accagcctgttatcggctgacggctatatcaccattctggatcagcaaaccttagatgcc
tgggtggagaagctgaaaaacagcgaggtctttgcgttcgatctcgaaaccgatgggctg
gatacgttaacggctaatatcgtcggcctcagttttgcggtagcgccaggtgaggcggct
tacctgcccgtggcacatgattaccttgatgcgccggagcagctcgaccgcgatgccgtt
cttgcccaactcaagccgctgctcgaagatcctgacgccagtaaagtggggcaaaatctc
aaatacgatcgtggcgtgctgaaaaactacgatattgaactcgccggtatcaaatatgac
accatgctggagtcatatattctgaacagcgtagtaggcaagcatgatatggacagcctg
tctgcgcggtggctgaatcataaaaccattacctttgaagagatcgccggtaaagggaaa
aatcagctcacatttaatcaaatcgctttagagcaggctgcacattacgcagcagaagat
gccgatgtcactctgcaactgcatttgaaaatgtggcctgagcttgaaaaagaagccggc
cctaaaaaggtttttgaacaaattgaaatgcccctgcttaaggtgatttcacgtgttgag
cgtaacggcgtattgatcgatcaagccattctggcgcagcactctaaagagctgacatcg
cgcctggctgagcttgagcttaaagcgcatgagctggcgggcgagccctttaatctctca
tcgaccaagcagctgcaggtcatcctgtttgaaaagcagggcattaagccgacgaagaaa
acacccggaggcgcgccttctaccagtgaagaagtcctggctgagctggcactggactat
ccgctgccaaaggtcattctggagcaccgtgggttgtcgaaactgaagtcaacttacact
gataaactgccgctgatgatcaatcctgtcagcggtcgcgtgcacacgtcctatcatcag
gcggtaacggctaccggtcgcctgtcttcaaccgatcctaacctgcaaaacatcccggtc
cgtaacgatgaaggacgccgcattcgtcaggcctttgttgcgggcaaggggaaccgtatc
gtggcggcggactattcacagattgaactgcgtatcatggcgcatctgtcacaggataaa
gggctgcttgatgccttttctcagggagaagatattcaccgtgccactgcgtcagaggtc
tttggcgtgccgctgtctaaggtcacgggcgaacaacgtcgtagcgccaaggccatcaac
tttggtcttatctacggcatgagcgcgtttggattatctcgccagctgaacattggcgca
ggcgaagcgaaaaagtatatggatttgtacttcgagcgctatcctggcgtgctgcgctat
atggaaaacacgcggcagcttgcagccagtaacgggtatgttgaaacgctggatggacgc
cgtttgtggttgcccgacatcaagtccagtaatgccattcgtcgtaaagctgctgaacgt
gcggcgattaatgcccccatgcagggaacggccgcggatatcatcaaacgcgctatgatt
gcggtcgatgactggttacaaaagcaaaccgatgatgcggtcaggatgatcatgcaagtg
cacgatgaactggtgtttgaaatcaaagctgaagccgtcgatgaagccagcaagcagatt
cgcgcgctgatggagggcagtatggcgctggatgtccccttactggtcgaagtcggcgta
ggcgacaactgggatcaggcgcattaa
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