Pantoea ananatis LMG 5342: PANA5342_0146
Help
Entry
PANA5342_0146 CDS
T01728
Symbol
rfaL
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00540
Lipopolysaccharide biosynthesis
plf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PANA5342_0146 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
PANA5342_0146 (rfaL)
Enzymes [BR:
plf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
PANA5342_0146 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
plf01005
]
Core region
PANA5342_0146 (rfaL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
CCF07539
LinkDB
All DBs
Position
161307..162515
Genome browser
AA seq
402 aa
AA seq
DB search
MTIKFKVPAIVLALSCVSFSTALNASTVCRNALFMAFIISFFDIFFNRRNLKTDSVFYFS
LTSAFLALGLILHAKFFHSIVMFSVDENYYYVAIRILMASVIIYYLAQQKEYISKNGFLF
SKILILVGFLYVSVQGILIHYQNPGVRLEIKTVATTVAYVYAIQAFAAIYVTSTLKTKFS
FLLNVLVILLGFYVLLLTETRSVILTYPILVFVFLAQSKLINRNIILLMVAIIAITFFIN
HKPFYNAFERIVSTSSEIKDYNANNGNTSLGARFSLWKAGLYAFAKHPMGQSADQRYIEI
KNYIDQYEHKNPEALRAIDFHMHNEFIDSLSLRGIWGALLLASFFFSLAYIFIKNNESIA
GVILLLTPNFIYGLTDTLFIDLRCAIVLMLGVPVYLLIKRQA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacgataaaatttaaagtgccagcaatagtactcgcactaagttgtgtatctttttca
actgcattgaatgcgtcaacagtctgtcgcaatgcactttttatggcattcataatatca
ttttttgatattttttttaacagacggaatttaaagacagatagcgtcttttatttttcg
ctgacgagtgccttcctcgctttaggacttatcttgcatgctaagtttttccattcaatt
gtaatgttttcagttgatgaaaactattattacgtagcgattcgcatattgatggcgagc
gttatcatttactaccttgcgcaacagaaagaatatatctcaaagaatggttttttgttt
tccaagattttgattcttgtaggttttttatatgtttccgtgcaagggattctcattcat
taccaaaacccgggtgtccgactggaaatcaaaactgttgcgactactgtagcctatgtc
tatgctattcaggcttttgcggctatatatgttacttcgactttaaaaacaaagttttca
tttttattgaatgtcttagtcattcttcttgggttttatgtgctgttacttactgagacg
cggtctgttatactaacctacccaatattggtttttgtttttttggctcagtcaaaactt
attaacaggaacattatcttactgatggttgcaatcattgcgatcactttttttattaat
cataagccgttttacaatgctttcgaaagaattgtctctacatcaagtgagattaaagat
tataacgccaataatggaaatacttctcttggtgcgagatttagtttatggaaagcagga
ctgtatgcttttgcaaaacacccaatgggtcaaagtgcagatcagcgttatattgagatt
aaaaattatattgatcaatatgaacataaaaatcctgaagcattacgtgcaatagatttt
catatgcataatgaattcattgatagccttagcttaaggggtatttggggcgctttgcta
ctggcatcattctttttttcactggcctatattttcataaaaaataatgaaagtattgcc
ggcgtcattttgctcttaacgcctaattttatttatggcctgactgacactttatttatt
gatttacgctgtgcaatagtgcttatgctgggggtacctgtctatctgttaattaaaaga
caggcatag
DBGET
integrated database retrieval system
