Pantoea ananatis LMG 5342: PANA5342_0281
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Entry
PANA5342_0281 CDS
T01728
Symbol
yddP
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PANA5342_0281 (yddP)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plf02000
]
PANA5342_0281 (yddP)
Transporters [BR:
plf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PANA5342_0281 (yddP)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_16
DUF3987
DEAD
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCF07674
LinkDB
All DBs
Position
complement(309942..310928)
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AA seq
328 aa
AA seq
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MQERILTIEDLRLSFPVYQGEVNVLNSVSMHINRGEIVGVVGESGSGKSVTAMLAMRLIP
EHSYHIKGGRLELAGQDVLAASEVDMRKMRGNRVAMIFQEPMTALNPTRRIGKQMVDVIR
QHRPLSVREAKARALTLLGDMQIADAKNVMERYPFELSGGMRQRVMIALAFSCEPDLLIA
DEPTTALDVTVQRQVLRLLKQKAEATGTAVLFISHDMAVVSQLCDRIYVMYAGSVIESGV
TETVLRSPRHPYSIGLLACSPDAIEPRAPLASISGTVPNLACLPAGCAFRDRCFAAGERC
TTTPRLHTTDNAAQQVACWYPQQEAQHV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagaattctgacgatcgaggatttacgtctcagcttcccggtttatcaggga
gaggtgaacgtgctgaatagcgtatcaatgcacatcaatcgcggcgagattgtgggcgtt
gtcggcgaatcaggttcggggaaatccgtcaccgccatgctggcgatgcggctcattccg
gaacacagctatcacatcaaaggcggcaggctggagctggcgggtcaggatgtcctcgcc
gccagtgaagtggacatgcgcaaaatgcgcggcaatcgtgttgccatgatttttcaggag
cccatgaccgcgctgaatccgacccgccgcattggcaaacagatggtcgatgtgatcaga
cagcatcgtcctctgtctgtccgtgaggcaaaagcccgggcgcttacgctgctgggcgat
atgcaaattgcggatgcgaagaacgttatggagcgctatccctttgaactgtcaggcgga
atgcgtcagcgcgtcatgattgccctggccttttcctgtgagccagacctgctgattgcg
gatgaacccacgaccgcactggatgttaccgttcagcggcaggtactgcgcctgttgaaa
caaaaagccgaagcgaccggcaccgccgtgctgtttatcagtcacgatatggctgtggtt
tcacagctgtgcgatcggatctacgttatgtatgccgggtccgtcattgaaagcggcgtc
actgaaaccgtgctgcgttcaccacgccatccctattccattggtctgctggcctgctcg
cctgacgcgattgaaccgcgtgctccgctggcatccatttccggcaccgtgcctaatctg
gcctgtttacccgcaggctgtgcctttcgcgatcgctgttttgcggcaggagaacgctgc
accaccacgccgcgcttgcatactaccgacaacgccgcgcagcaggttgcctgctggtat
ccacaacaggaggcgcagcatgtctga
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