Pantoea ananatis LMG 5342: PANA5342_0498
Help
Entry
PANA5342_0498 CDS
T01728
Symbol
yjeP1
Name
(GenBank) MscS mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plf02000
]
PANA5342_0498 (yjeP1)
Transporters [BR:
plf02000
]
Other transporters
Pores ion channels [TC:
1
]
PANA5342_0498 (yjeP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
CCF07891
LinkDB
All DBs
Position
complement(522150..525485)
Genome browser
AA seq
1111 aa
AA seq
DB search
MFVRSIFCLLLSLWLSSSTLAASLPDASQLKQQLEEVKATKNAPSQTEQIQSLEAALASL
SERDDALERAQQYQQVIDDFPRLARELRQQIATLNDNAKTVRSTMSSAELEQEILQISSQ
LIEEGRQAQQEQDRAREISDSLSQLPQQQTEARRALTESERRLQSAGSAATPVGQAQLVA
RQAENAANKAKVDEYELAQLSANNRQELARMRAEVHQRKVTQLDNYLQALRNQLNEQRQR
EAETALARTEQLAENSGDLPPEISEQFRVNRDLSGALNQQAQRMDLVASQQRLATNQIIQ
VRQALATLREQSQWLGASNLLGDALRAQVARLPDMPKSQQIDNEMAQLRVQRLHYEDLLE
RQNALRKAHQADGQPFTSDQKRILDAQLKTQRELLNSLISGCDTLILEITKLKVANTQLQ
DALTEVKDATHRYLFWTADVSPISLSYPLDVAKGLSHLLTLDTLGQLGKALAMMFTSRST
VLPILGAVLLVGFSLSTRRHFNAFLERSASKVGKVTQDRFRLTIRTVFWSILVALPLPVL
WATLGYGLQNAWPYPVAVAIGDGITATLPLLWIFMVSAQFARANGLFIVHFRWPQVRVAR
AMRYYSLSIGLIVPLIMLLITFDNLDDRLFSATLGRLCFILICGALSLVTVSLKRAGIPL
YLDKEGNGENMINRLLWNIMIAIPLLAALASMIGYLETAQALLARLETSVAIWFFLLVIY
HIIRRWMLIQRRRLGFDRARQRRADMLANRARNEEEKDQAQNTDVIEIEEPVIDLDAISA
QSLRLVRSILTLIALVSVIVLWSEIHSAFGFLENIRLWDVNTSVQGVESIQPITLGAVLI
AILVFVITTQLVRNMPALLELALLQHLDLSPGTGYAITTLTKYLLLLIGGLLGFSLIGIE
WSKLQWLVTGLGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSITRINTRA
TTITDWDRKEIIVPNKAFITEQFVNWSLSDSVTRVVLTIPAPAQVSSEEVTTLLKLAAER
CSYVLDTPPPEVFLVDLQQGIQLFELRVHAAEMGHRMPLRHELHQLILHGFAEHGIEMPF
PPFQMRVETLSRKTPAGNGASTTRTFKSGGL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgcgttcgatcttttgtctgctgctgagcctctggctcagctcttctacgcta
gccgccagcctgcctgatgccagccagctcaaacagcagctggaagaggtcaaagccact
aaaaatgccccctcgcaaactgaacaaattcagtcactggaagccgcactggcctcgctc
tctgaacgcgatgatgccctcgaacgcgcacaacagtatcaacaggttattgacgatttt
ccgcgccttgcccgcgagttaaggcagcaaatcgccacgcttaacgacaacgctaaaacc
gtgcgcagcacgatgagcagcgcagagctggaacaagagattctgcaaatcagcagtcag
ctgattgaagaaggacgccaggcccagcaggagcaggaccgtgccagagagatcagtgat
tccctgtcgcagttgccacagcagcaaacggaagcgcgccgggcactgaccgagagcgaa
cggcgcttacagagtgccggcagcgctgccactccagtaggtcaggcccaactggtggct
cgccaggcagaaaatgccgccaataaagccaaagtcgatgagtatgagctggcgcagttg
tcggccaacaatcgccaggagctggctcgcatgcgcgccgaggtgcatcagcgcaaagtg
acccagcttgataattatctgcaggctttacgtaatcaactgaatgaacaacgtcagcgc
gaggccgaaacggcgctggcgcgtacggaacagctggcggaaaacagtggtgatttaccg
cccgagatcagtgagcagtttcgggttaaccgcgatttgtccggtgcgctgaatcagcag
gcacagcgcatggatctggtggcatcgcaacagcgcctcgccaccaatcaaattattcag
gtccgtcaggcgctggcaacgttgcgggaacaatcccagtggctgggtgcctctaacctg
ctcggcgatgcgcttcgggcacaggtggcgcgtttacccgatatgccgaaatctcagcaa
atcgataatgaaatggcacagctgcgcgttcagcgcctgcattatgaagatcttctggaa
cgacagaatgcgcttcgcaaagcacatcaggcggacgggcagccttttaccagcgaccaa
aagcgcattctggatgcacagttaaaaacgcagcgagaattgctgaactccctgatatcc
ggctgcgatacgctgattctggaaatcactaaactcaaggtcgccaatacgcagcttcag
gatgcgttaaccgaagtcaaagacgccacgcaccgctatctgttctggacagcagatgtc
agccccatttcattgagctatcctctggacgtggctaaaggcctgtcgcacctgcttacg
ctggatacgcttgggcagcttggcaaagctctggcaatgatgtttaccagccgcagcacc
gtcctgcccattttgggtgccgtgttgctggtcggttttagcctgagtacacgccgtcac
ttcaacgcttttttggaacgctcagccagtaaggttggtaaggtcacccaggatcgcttc
cgcctgaccatccgcactgttttctggtcaattctggtcgcgcttccgcttcctgtgctt
tgggcaaccctgggatacgggctgcaaaacgcctggccgtatccggtagccgttgctatc
ggcgatggcattacggcgacgctgcctctgctgtggatattcatggtcagcgcccagttt
gcccgcgccaacggtttgttcattgtgcatttccgctggccgcaggtacgcgttgcgcgt
gccatgcgttactactcgttgagtattggcctgatcgtgccgctgattatgctgctgatc
acctttgataaccttgacgatcgtcttttctctgccaccctgggccgactgtgttttatt
ttgatctgtggcgccctgagtcttgttacggtaagtctaaaacgtgcagggatccctctt
tatcttgataaagagggcaacggcgaaaacatgattaaccgcctgctgtggaatattatg
atcgccattccattgctggccgcgctggcctccatgattggttaccttgaaacagcgcag
gcgctgctggcacgtctggaaacctcggtggcaatctggtttttcctgctggttatttac
catatcattcgccgctggatgctgattcaacgacgcaggctggggttcgatcgcgcacgc
cagcgccgggccgatatgctggccaatcgcgcgcgcaacgaagaagaaaaagatcaggcg
caaaatactgacgttattgaaatagaagagcccgtgattgatttggacgccatcagtgct
cagtcactgcgcctggtcaggtcaatcctgacgctgattgcgctggtgtcagtcattgtc
ctgtggtcggaaatccactctgcgtttggtttccttgagaatattcgtttatgggatgtc
aacacctccgttcagggcgtggagagtattcaacccattacgctgggcgccgttctgatc
gccatcctggtgttcgtgattacgacgcagctggtgcgcaatatgccggccctccttgag
ctggccctgctgcagcatcttgatttgtcgccaggcaccggctatgccattaccacgctg
accaagtatttgctgctgctaattggtggcttgctcggcttctcattgattgggattgaa
tggtccaagctgcaatggctggtgaccggcctgggcgttgggttgggatttggcctgcag
gagatttttgcgaactttatctccggcctgattattttgtttgaaaaacccattcgtatt
ggcgataccgttactattcgcgatctgaccggcagcattacgcgcatcaatacccgcgcc
acgacaattacagactgggatcgcaaagagatcatcgtgcctaataaggcctttattaca
gaacagtttgttaactggtcgctgtcggactccgtcacgcgcgtcgtgctgaccataccc
gctcccgcacaggtaagcagcgaggaggtcaccacgttgctgaagctggctgcagaacgt
tgtagctacgttctggatacaccgccgccggaagtgtttctggttgacctgcagcaggga
atacagttatttgagctacgcgtacacgccgctgaaatgggccatcgcatgccgcttcgc
catgaactgcatcagcttattctgcacggctttgcagaacatggtatcgaaatgcctttc
ccacccttccagatgcgggtagaaaccttaagcagaaaaacgcctgccggaaatggtgcg
tcgacgacgcggacttttaaatcaggcggattataa
DBGET
integrated database retrieval system
