Pantoea ananatis LMG 5342: PANA5342_0936
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Entry
PANA5342_0936 CDS
T01728
Symbol
gcvA
Name
(GenBank) glycine cleavage system transcriptional activator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_0936 (gcvA)
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PANA5342_0936 (gcvA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CCF08329
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Position
962323..963240
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AA seq
305 aa
AA seq
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MSKRLPPLNALRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSALNEATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNLAY
PGIDVRIQAVDRDEEKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPALMTGENPL
KTPMDLARFTLLHDASRRDWQSYIRQLGVQHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLICPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAATEQEKFR
FRYDQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtcttcctccccttaatgcactgcgggttttcgatgccgcagcacgccat
ttaagcttcaccaaagcggctgaagagctgtttgtcacccaggctgccgtcagccatcag
atcaaatcactggaagattttctgggattaaagctgttcaggcggaggaatcgttcgctt
ttgctcacggaagaggggcaaagctactatctggacattaaagaaatcttctctgccctg
aatgaagccacgcgcaagctgcaggcacgcagtgccaaaggcgcgctcacggtcagttta
ctgccgagttttgccattcaatggctcgtgccgcgcctctccagctttaatctggcttat
ccgggaatcgatgtccgtatccaggccgttgaccgcgatgaggagaaactggccgacgat
gtggacgtggcgattttctatggtcggggcaactggcctggcttacgggtggaaaaactc
tacgcagaatacctgctgccggtctgttctccggcgttgatgaccggggaaaatccgctt
aaaacccctatggatcttgctcgctttactctactgcatgatgcgtcgcgtcgtgactgg
caatcctatattcgccagctcggcgttcagcatatcaacgttcaacagggccccatcttc
agtcacagcgccatggtgttgcaggcggcgattcatggtcagggcgtggcattggccaat
aacgttatggcgcagagcgaaatcgaagcggggcggttgatttgtccgtttaatgacgtt
ttagtgagcaaaaatgctttttatctggtttgtcatgacagccaggcagaactgggtaaa
atagccgcctttcgacagtggatcctcgctaaagcggcaaccgaacaagaaaaattccgc
tttcgttatgatcagtaa
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