Pantoea ananatis LMG 5342: PANA5342_1034
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Entry
PANA5342_1034 CDS
T01728
Symbol
yfiF
Name
(GenBank) tRNA/rRNA methyltransferase SpoU
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plf03009
]
PANA5342_1034 (yfiF)
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_1034 (yfiF)
Ribosome biogenesis [BR:
plf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PANA5342_1034 (yfiF)
Transfer RNA biogenesis [BR:
plf03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PANA5342_1034 (yfiF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
CCF08427
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Position
1070728..1071846
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AA seq
372 aa
AA seq
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MNDEFKGKSGKVKVMYVRGEDEQSARAPNPRTGKGGRPAARREDNRRSSGPRTERSEEGG
RGTGRRSDSAPRRSDSAPRRNDRGSDNRDAYGSSDSPWRTVSRAPVVEDNKPENPGISGK
GVVDVEQIRRQRLEETRVYGENACQALFQSRPECIVRAWFVQSVTPRFRDALRWLAANRK
AYHVVDDAEITKASGTEHHGGVCFLIKKRMGMDVAEWLNKAESKDCVLALEDVSNPHNLG
AIMRSCAHFGVKGLLVNDASLLESGAAVRTAEGGAEHVQAISGATFNEGLEAFRKAGYTI
VTTSSHQGTSLSDAVLPAKMVLVLGQEREGLSDSTFQQGDMSVSIGGTGNVESLNVSVAT
GVLLAEWWRQNA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaatttaaaggcaaaagtggtaaggtcaaagtcatgtatgtgcgtggcgaa
gatgagcaaagcgcgcgcgcgccgaatcctcgtacaggcaaaggtggccgtcctgctgct
cgccgtgaagacaatcgtcgttcatccggcccgcgcactgagcgtagtgaagaaggcggt
cgcggcacaggccgtcgcagcgatagcgcgccacgccgcagtgacagcgcaccgcgccgc
aacgatcgcggcagcgacaatcgtgatgcttacggcagcagtgattccccatggcgcacc
gtctcccgcgcgccggtcgtggaagacaacaaaccggaaaacccagggatcagcggtaaa
ggcgtggttgacgttgagcagattcgtcgccagcgtctggaagaaacccgcgtttacggt
gaaaacgcctgtcaggcgctgttccagagccgtcctgaatgcatcgttcgcgcctggttt
gtgcaaagcgtgacgccacgtttccgcgatgcgctgcgctggctggcggctaaccgcaaa
gcctaccacgtggtcgatgacgcagagatcaccaaagcttccggtactgaacaccacggc
ggcgtctgcttcctgatcaagaaacgcatgggcatggacgtagcagaatggcttaacaag
gccgaaagcaaagactgtgtactggcgcttgaagatgtcagcaatccccataaccttggc
gcgatcatgcgcagctgcgcgcactttggtgtgaaaggtctgctggttaacgatgcctcg
ctgctggaatccggtgcagcggttcgcacggcggaaggcggcgctgaacacgttcaggct
atcagcggcgcaacctttaatgaaggcctcgaagccttccgcaaagcgggttacaccatc
gtgacgacctcgagccatcagggcacatccctgtctgacgcggtgctaccggccaaaatg
gtactggtgctgggtcaggagcgtgaaggcttgtctgacagcacgttccagcagggcgat
atgagcgtgtcgattggtggcaccggcaacgtggaaagtctgaacgtctccgtcgctacc
ggcgttctgctggccgaatggtggcgtcagaacgcctga
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