Pantoea ananatis LMG 5342: PANA5342_1559
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Entry
PANA5342_1559 CDS
T01728
Symbol
ydfH
Name
(GenBank) GntR family transcriptional regulator
KO
K22293
GntR family transcriptional regulator, rspAB operon transcriptional repressor
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_1559 (ydfH)
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PANA5342_1559 (ydfH)
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_20
TrmB
HTH_24
Rrf2
Fe_dep_repress
HTH_DeoR
RPA_C
Motif
Other DBs
NCBI-ProteinID:
CCF08952
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Position
complement(1638895..1639581)
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AA seq
228 aa
AA seq
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MTLSYTITTSEPVNQQVYRYLRRDIVTCVIQPGALLSEKEVSARFNLSRQPVREAFIKLA
EAGLVQILPQRGTFVRRISAKRVEDGRFIREAVEIAVVRRAAEEIEESGLMALEHNLQLQ
RITAARGDSQMFLSLDDEFHRLIAESIGCPLAWETVENIKATMDRVRYLTLNDVAPAETL
IEQHDAIFAALKANDPVKAEAALRHHLQAMMFSITPVIKQNSAWFEED
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcttacaccattaccaccagcgaaccggtgaatcagcaggtttatcgctat
ctgcgccgcgatatcgtgacgtgcgtaattcagccgggcgcactgctctcggaaaaagag
gtttccgcccggttcaacctctcacgtcagccggtgcgggaagcctttatcaagctcgcg
gaggccggtctggttcagatcctgccgcagcgcggcacctttgtgcgcaggatctcggct
aaacgggtcgaagatggtcgtttcattcgtgaggccgtggagattgccgtggtccgtcgc
gctgctgaggaaatcgaagagtcagggctgatggcgctggagcataacctgcaactgcaa
cgcatcaccgctgcccgtggcgatagccagatgttcttaagcctggacgatgagtttcat
cgcctcatcgctgagagcatcggctgtccgctggcgtgggaaacggttgaaaacatcaaa
gccaccatggatcgggtacgctatttaaccctgaatgacgttgcgcccgccgaaaccctg
atagaacagcatgatgctatttttgcggcgctgaaggcaaacgatcccgtcaaggctgag
gcggcgttgcgccatcatttgcaggccatgatgttttcgatcaccccagtcatcaagcaa
aacagcgcctggtttgaagaggattaa
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