Pantoea ananatis LMG 5342: PANA5342_1754
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Entry
PANA5342_1754 CDS
T01728
Symbol
rhsD1
Name
(GenBank) RHS Repeat family protein
Organism
plf
Pantoea ananatis LMG 5342
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TNT
DUF6531
PAAR_motif
RHS
Tox-PAAR-like
Motif
Other DBs
NCBI-ProteinID:
CCF09147
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Position
1864699..1869153
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AA seq
1484 aa
AA seq
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MDNRAARVGDEIIHSSIFADITSIVAEGAAYAVIGAAVGVAATAAAPLLGAGMAAAGVAA
IGSSCLLSGIIGGVLANAAGISDDITKAADGLGDMIFPPSPAGVIASGSENVHVNGLLAA
RAAGMLTPGDTPPPEPQSPKSFADYGGMLLSAVGQFGSAMWQPTVASADAGTSPLEQDKV
ACEKHSAPQYLAQGSKSVFINGQPAVRAKDKTTCDATVSDDVSPNVIIGGETVTVREIKS
GKVPGLAVMMIGLSLIRGRPSQILKNMPCALASAVGGMMADMAINAAFSSLFPVHASTGV
KVLNDDAERDFSLPGRFPLSFQRSYNSLTQRSGLFGLGWATVFDSYITLDGNQATWFDDN
GRELSFAVPGEKEVLYSISEGLMVRRNELGDIAIADDDGAVWRLYRRTAADPQVLRLASL
SDEYGNALEMGWDEQARLVRIHDAPLAIDVTLHYDDKQHAQRPTSASHFDGEQHWPLTLW
TYNEQGQLASVTDAAGVVSRRFRYNDDGLMIWHQLPGGLESEYRWQKLDHWRVVENRTNT
GDGCHMHYDLDAGITRVSTYDGQQREHHWNAAGLITCFIDERGETWRYEWDENELLTRRI
DPLGNAVSFTYDDLGNRVEEKDADGGVQAVQWLSHRSLPTVVAGADGATTKYYYDPHHGL
ERVVDALGQSTFYKRDEFGLVVEEIDAAGNSYRREFNDAGQVIRETDCSGLTTRYRYHPL
GWLSCVTAPDGEETRYHYDAAGRPVLLERAEGWEERLRWSDNGLPLAHESADGKRSEFRY
DNVGRLIANRNAQGETVQRSWDSRGRLTALQNENGEQYQFEWGADSLLLAQVGLDGVATR
YDYDAAGRTVSRTFAAGHPQAITHRYHWSRAGQLLARTTPEGQTRYHYSGGGQLSKVSQH
LPLSDTEWSQQAEQEIAFTYDALGRIVGEQGEQGALAWDYDALGNCTALTLPDGRNLKQL
YYGSGHLLSIALDNLPVTEFTRDTLHRELSRTQGGLTTRSEYDRLGRLRRRDVFKGEAQR
PAPRVWSRRRDFDYGNNLIREERDDNPFSQTLWHYDNAGRLLSQEGAQPGNEQWRWDGAG
NPLDRHAASHIMHNRVTELNGIRWQYDIHGRTTEKDDGQTRWRYRYDGEHRLTDVISEPR
DRNKPRTKVSFRYDPLGRRISKTRQQLLQGRPSGKAITTRFVWEGYRLLQEIHDDTPLTY
VYSDSQSYEPLARIDGVESPEIFWFHCAANGTPELLTDVEGQKTWEGVNSPWGKLLRESN
QRIPVVEQNLRMQGQYLDRETGLHYNLFRYYDPDSGRFTQQDPIGLAGGINLYQYAPNAL
GWVDPLGLSRCKNEWNEFQKKSNNNQFTSRKQASKAYALWKKQDWAALEQFMGEGAWPPN
RGFVKATRTTLQPGTLVDRYGGWIDEKGFHDTGTFISPVGSSFEGRALQSSTLDKPYSIY
EVLKPLPVDTGPAIPWFGQPGYGTQHETFLKIDKLIEKGYLRKV
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggataaccgtgcggcccgcgtgggcgatgagatcattcattccagcattttcgctgat
atcaccagtattgtcgctgagggcgcagcctacgccgtgatcggtgcggcggtcggtgtg
gcggcaacagcagcagcaccattgctgggtgcaggaatggctgcggcaggcgtggcagcc
attggttccagctgtctgctcagcggcattattggcggtgtattagcgaacgctgcgggc
atttcggatgacatcactaaagcggccgatgggctgggagacatgatattcccgccttct
ccagccggtgtgatcgccagcggatcagagaatgttcacgttaatggtcttttagctgca
cgcgcggccgggatgcttacgcccggagatacgccgccaccggaaccgcaatcgcccaag
agtttcgcagactatggcggcatgctgctctctgcggtgggtcagtttggcagtgcaatg
tggcaacccacggtggcttccgccgacgctggcacctctccgcttgaacaggacaaagtg
gcctgtgaaaagcacagcgcaccgcaatatctggcgcagggatcgaaaagcgtctttatc
aatggccagcctgcggtgcgggcaaaggataaaaccacctgtgatgccaccgtgagtgac
gatgtttcccccaatgtcatcattggtggtgaaaccgtcacagtaagagagattaaaagt
ggcaaggtgccaggtctggccgtgatgatgatcggcctttccctgattcgtggtcggccc
agccagatcctgaaaaacatgccctgtgcgctggcgagcgctgtaggcgggatgatggcg
gatatggcgattaacgccgccttctcgtcgctgtttccggttcatgcctccacgggcgtc
aaagtgcttaacgatgatgccgagcgcgatttctcccttcctggtcgcttcccgctcagt
ttccagcgtagctataacagcctgacccagcgcagcggattatttggtctgggctgggcg
acggtgtttgacagctatataacgctggatggcaatcaggcgacctggtttgatgacaac
gggcgcgagttgagctttgcggttcccggtgaaaaagaggtgctctacagcatcagcgaa
gggctgatggtaaggcgcaacgaactgggtgatatcgccattgccgacgacgacggtgcg
gtatggcgtctgtacagacgtacggccgcagatccgcaagtgctgcggctggcttcactg
agcgacgaatacggcaatgcgctggagatgggctgggacgaacaggctcgcctggtgcgc
attcatgacgcgccgctggccattgacgttaccctgcattacgacgacaaacagcatgca
cagcgcccgacctcggccagtcactttgatggtgagcagcactggccattaacgctctgg
acttacaatgaacagggccagcttgccagcgtcaccgatgccgcaggcgttgtctcgcgg
cgcttccgttacaacgatgacgggttaatgatctggcatcaactgccgggcgggctggaa
agcgaatatcgctggcagaagctggatcactggcgcgtcgttgaaaaccgcaccaatacc
ggtgacggctgccatatgcattatgatcttgatgctggcatcacgcgcgtatcgacctat
gacggtcagcagcgagaacatcactggaatgctgcagggctcatcacctgctttattgat
gagcggggcgagacctggcgctatgagtgggatgaaaacgaactcctgacgcgccgtatc
gatccgctgggtaatgcggtgagcttcacctatgacgatctcggcaaccgtgtagaagag
aaagatgcggacggcggtgtacaggcggtgcaatggctgtcacaccgttctctgcccacg
gtcgttgccggggctgacggtgccaccacgaaatactattacgatccccatcatggcctt
gagcgcgtggttgatgcgctcgggcagagtaccttctataagcgggatgagtttgggctg
gttgtcgaagagattgacgcggcaggcaacagctaccgtcgtgaattcaatgatgccggc
caggttatccgcgaaacagactgttcagggctgacgacgcgctaccgctatcatcccctt
ggctggctcagctgtgtgactgcgccggatggtgaagaaacccggtatcactatgatgct
gcgggccgtcctgttctgctggagcgggcagagggctgggaagagcgattgcgctggagc
gacaacggcctgccactggcccacgagtcagcggatggtaaacgtagtgaattccgctac
gacaacgtcgggcgcttaatcgccaaccgtaatgcccagggcgagacggttcagcgcagc
tgggacagccgtggtcggttgacggcgctgcaaaacgagaacggcgagcagtatcagttc
gagtggggcgcagattccctgttgctggcccaggttgggctggatggtgttgctacacga
tatgactatgatgcggcgggccgcacggtatcacgcacctttgccgccgggcatcctcag
gcgattacccatcgctatcactggagccgtgcggggcaactgctggcacggaccacgccg
gaaggccagacgcgctatcactacagcggtggtgggcagttaagtaaagtgtcgcagcat
ctgccgctgtctgacaccgagtggagccagcaggccgagcaggagattgcgtttacctat
gatgcgctgggccgcatcgtaggtgagcagggtgaacagggcgcgctggcctgggattac
gacgcgctgggtaactgcacggccttaaccctgccggatggtcgcaatctgaagcagctt
tactacggcagcggccatttactgagcatcgcgctggacaacctgccggtcaccgagttt
acccgtgacacattgcatcgggaactcagccgcacgcagggcggcctgaccacgcgcagt
gagtatgaccggttgggcaggctgcgccgccgtgacgttttcaaaggtgaagcacagcgt
cctgcgccgcgcgtctggtcccgtcggcgggacttcgattacggcaacaacctgattcgt
gaagagcgcgacgataacccgttcagccagacattatggcactacgataacgccggtcgg
ctgctgtctcaggaaggcgcgcagccgggtaatgagcagtggcgctgggatggcgcaggc
aacccgctggatcgccatgccgcttcccatatcatgcataaccgtgtcactgaactgaac
ggtatccgctggcagtacgacattcatggccgcaccaccgaaaaggatgacggccagacc
cgctggcgctaccgttacgatggtgagcaccgcctgacggatgtcatcagcgaaccgcgg
gaccgcaataagccacgtactaaggtgagcttccgctacgatccgctgggtcgacgcatc
agtaaaacccgccagcaactgttacagggcaggccgtctggcaaggccatcacaacgcgc
tttgtctgggaaggctatcgtctgctgcaggagatccacgacgatactccacttacctat
gtgtacagcgacagccagagctatgagccgctggcccgtattgatggcgtggaaagcccg
gagatattctggtttcactgcgcggcaaacgggacgccggaactgctgaccgacgttgaa
ggccagaaaacctgggaaggtgtgaacagcccatggggcaaactactgcgcgagtctaac
cagcgaattccggtggtggagcagaacctgcgtatgcagggccagtacctggatcgtgaa
accgggctgcactacaatctgtttcgttattatgacccggacagcggacggtttacccag
caggacccgatagggctggcgggcggtattaacctttaccagtatgcgccgaatgcgctg
ggctgggtggatccgttggggttgagtaggtgtaaaaacgaatggaatgagtttcagaaa
aaatcgaacaataatcaatttacttcaaggaaacaagcatccaaagcatatgctttatgg
aaaaaacaagactgggcagcgttagaacaatttatgggtgaaggtgcttggccacctaat
cgcggtttcgtaaaagcaacaagaacaactcttcaacccggcactttagttgatcgatat
ggtggttggatcgatgaaaaaggattccatgatactggtacttttatttctccagtaggt
tcatcatttgagggcagggctttacaatcgagtacactggataaaccttattcaatttat
gaggtattgaagccattgccggttgatactggaccagctataccatggtttggacagcca
ggctacggaacgcaacatgaaacctttttgaaaattgataaactaatcgagaaaggctat
ttgaggaaagtatga
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