Pantoea ananatis LMG 5342: PANA5342_1838
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Entry
PANA5342_1838 CDS
T01728
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf02020
Two-component system
plf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PANA5342_1838 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PANA5342_1838 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plf03021
]
PANA5342_1838 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plf02035
]
PANA5342_1838 (fliA)
Transcription machinery [BR:
plf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PANA5342_1838 (fliA)
Bacterial motility proteins [BR:
plf02035
]
Flagellar system
Flagellar assembly proteins
Stator
PANA5342_1838 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Sacchrp_dh_C
UPF0122
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
CCF09231
LinkDB
All DBs
Position
1944260..1944982
Genome browser
AA seq
240 aa
AA seq
DB search
MNDLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWAPRSVRRNAREVAGAMHQVEQMLGRAASEQEV
AQQLNVSIEEYRQILLDTNNSQLFSYDEYREEHGDSAELVTEGHEEANPLHQLMEGSLRE
RVIEAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLTGAR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatctctataccgccgaaggcgtgatggacaaacattcgctctggcagcgctac
gtaccactggtacgtcatgaagcactgcgcttgcaggtccgcctgccagccagtgttgaa
cttgacgatctgcttcaagccggaggcattggtctgttgaatgcggtggagcgctatgac
gcactccagggtaccgcctttaccacgtatgcagtacagcgcatccgtggagccatgctt
gatgagcttcgcagcagggactgggcaccacgtagcgtcagacgaaatgctcgcgaggtt
gcgggagccatgcatcaggtagaacagatgctgggccgcgctgcctctgagcaggaagtc
gcgcaacagttgaatgtttcgatagaagagtaccggcagattctgttggataccaacaac
agccaactcttttcgtacgacgagtatcgggaagaacacggtgacagtgcggaactggtg
acggaagggcacgaagaggccaatccacttcatcagttgatggaagggagtctgcgtgaa
cgcgtcattgaagcgatcgaggccttgcccgaacgcgaaaagatggtgctgacactgtac
taccaggaagaactgaatctgaaagagattggcgcggttcttgacgtgggggaatcccga
gtcagccaactgcacagtcaggcgataaaacgcttgcgtgcccgacttacgggagcgcgc
tag
DBGET
integrated database retrieval system
