Pantoea ananatis LMG 5342: PANA5342_1860
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Entry
PANA5342_1860 CDS
T01728
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
plf
Pantoea ananatis LMG 5342
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
NMT1
AAA_5
Phosphonate-bd
AAA
HTH_8
AAA_7
NMT1_3
AAA_16
AAA_2
AAA_22
AAA_19
AAA_30
nSTAND3
MCM
YLL032C_C
AAA_3
Imm5
Motif
Other DBs
NCBI-ProteinID:
CCF09253
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Position
1970189..1972075
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AA seq
628 aa
AA seq
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MQHAGPDLIDPASLAFRHILDQLAPTDATVLIIGETGTGKEVMARYLHHHSPRRHAPFMA
VNCGALTESLAESELFGHEKGAFTGATDRHRGWFEAAQGGTLLLDEIGELSLPLQVKLLR
VLQEREITRVGSSRAVKVDVRVIAATNRDLTTAIVERRFREDLYYRLNVASVALPPLRQR
CEDIPVLANYFLQSYARRLGRPQLRLSDEAMETLKAHSWPGNIRELENTLHNAVLLCETP
QVEPQQLRLGTVTGTGRVQKQDALDDFIRQQIQCSDTPLYPRVIEALVRNAYELSQGNQL
QAAALLGISRNSLRTHLGHYGIIKPRRSLTSTLRTASTTGAQERELRIGYQKFGNLGILK
ARQQLEQQLAGQNVSILWSEFPAGPQLLHALSNREIDFGTTGEVPPLFAQASHCSLVYVA
WEPPAPQSVALLVAKHSQINQMADLRGKRIAVNKGSNVHFLLLQILDEAGMTPEDVRIVY
APPKYPLTPSDLNAVDAWMMWDPLLSEAEKGEQLRVIADGVGRVNNHQFYLADRHFANQS
PDLLEILVTALEQTGRYIDAHPKEAAGLLAGELGMSDRALRLALARRSHQTQPMNLAIIR
EQQRIADRFYALGLFPRAINVRDAVWSQ
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacgctggccccgatttaattgaccctgcttccctggcgttcaggcatattctg
gatcagctggcgcccacggacgcgaccgtattaatcattggtgaaaccggcacgggcaaa
gaggtgatggcgcgctatctgcatcatcacagcccgcgccgccatgcgccctttatggca
gtgaactgcggtgcgctaacggagagcctggcagaatcagaactctttggtcatgagaag
ggggcatttaccggcgcgaccgaccgtcatcgtggctggtttgaggccgcgcagggcggg
acgttactgctggatgaaatcggcgagctgagcctgccgcttcaggtcaaactgcttcgc
gtactgcaggaaagggaaattacccgcgtggggtcttctcgcgcagtaaaggttgacgtc
cgggtgattgctgcgacgaaccgcgatctgacgactgcgatagtcgagcggcggtttcgc
gaggatctctactaccggttaaacgtcgccagcgttgccttgccgccgctgcgccagcgg
tgtgaggatatcccggttctggctaactattttctgcaaagctatgcgcgccgactgggg
cgaccgcagctgcgcctgagcgacgaggcaatggaaacgctcaaggcccattcctggcca
gggaatatacgggaactggaaaatacattacacaacgcggtgctgctctgtgaaacaccg
caggtagaaccacaacagctgcggctgggcacggtgacgggcacggggcgggtacaaaag
caggatgcgcttgatgattttattcgccagcagatccagtgcagtgacacgccactttat
ccccgcgtcattgaggcactggtgagaaatgcctatgaactaagccagggcaaccagtta
caggccgcggcgttgctggggattagccgtaacagcctgcgtacgcatcttggccattac
ggcatcatcaagccgcgtcgcagcctgacgtcaacccttcgcaccgcgtcaacaacgggc
gcgcaggagcgcgagttgcgcattggttatcaaaagtttggcaaccttggcatcctcaaa
gcgcgccagcagcttgaacagcagctggccgggcaaaacgtcagcatcctgtggagcgaa
tttcccgccgggcctcagctgctgcacgcgctgagcaatcgggaaattgattttggcacc
accggcgaagtgccgccgttatttgcccaggccagtcactgttctctggtgtacgttgcc
tgggagccgcccgcgccacaaagcgtggcgctgctggtggctaagcacagtcagataaac
cagatggcagacttaagaggcaaacgtattgccgtaaataaaggttccaacgtgcatttt
ctgctgctgcaaatccttgatgaggcggggatgacgccagaggacgtgcggattgtgtac
gcgccgcctaaatacccgctcacgcccagcgatctgaatgccgttgatgcatggatgatg
tgggatcctctgctgagcgaggcagaaaaaggggaacagctccgggtcattgccgacggc
gtagggcgggtgaataaccatcagttctatcttgccgatcgccacttcgcgaaccagtct
ccagacctattagaaatactggtaactgcgctggagcagacggggcgctacattgatgcc
catcctaaagaggccgccgggctgctggccggggagctggggatgtctgatcgcgcgctg
cgcctggcgctggcccggcggagccaccagacgcaaccaatgaatctggcgatcattcgt
gagcagcaaagaatcgcggatcgtttctacgcgctgggcctgtttccccgcgcgattaac
gtacgtgacgcggtgtggtcgcaatga
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