Pantoea ananatis LMG 5342: PANA5342_1921
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Entry
PANA5342_1921 CDS
T01728
Symbol
basR
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K07771
two-component system, OmpR family, response regulator BasR
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf01503
Cationic antimicrobial peptide (CAMP) resistance
plf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PANA5342_1921 (basR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
PANA5342_1921 (basR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plf02022
]
PANA5342_1921 (basR)
Two-component system [BR:
plf02022
]
OmpR family
BasS-BasR (antimicrobial peptide resistance)
PANA5342_1921 (basR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
Motif
Other DBs
NCBI-ProteinID:
CCF09314
LinkDB
All DBs
Position
complement(2021137..2021823)
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AA seq
228 aa
AA seq
DB search
MKILIVEDDALLLQGLVLALEGAGYVCDGVSTVRSAEAHLASGLYSLVVLDIGLPDEDGL
HLLQRLRRQKQMQPVLILTARDTIEERIAGLDAGADDYLIKPFALDELLARIRALIRRHV
NQGDSRLEVGNLSLDMTHRQIHLDDVLLDLTPKEFSILSRLMLKAGHPVHRELLYQDIYN
FDNEPSTNTLEVHIHNLRDKVGKATIRTVRGFGYALSQPRAENESSPE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgattgttgaagacgatgccctgctacttcaggggctggtactggcactg
gaaggtgcaggctacgtgtgcgatggtgtttcaacggtccgctctgccgaagcccacctt
gccagcggactttacagcctggtggtgctggatatcggcctgccggacgaagacggcctg
catttactgcaacgcctgcgtcgtcaaaagcagatgcagcccgttttaatcctgaccgca
cgcgataccattgaagagcgcatagccggactcgatgccggcgctgatgactatttgatt
aagccttttgcgctggatgagttgctggcacggattcgcgcgctgatcaggcgtcacgtt
aaccagggcgattcccgcctcgaagtgggtaatctgtcactggatatgacccaccgccag
attcatctggatgacgtgctgctcgacctgacgcccaaagagttttccattctgtcccgg
ttgatgttgaaagcaggccatccggttcaccgtgagttgctgtatcaggacatctacaac
tttgataatgagccctccaccaatacgctggaagtccatattcataacctgcgcgacaag
gtgggcaaagccacgatccgaacggttcgcggttttggctatgccttatctcagccgcgc
gcagaaaacgagtcatcacccgaatga
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integrated database retrieval system
