Pantoea ananatis LMG 5342: PANA5342_1972
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Entry
PANA5342_1972 CDS
T01728
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_1972
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
Other families
PANA5342_1972
SSDB
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Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
LigT_PEase
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
CCF09365
UniProt:
A0ACE3JI24
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All DBs
Position
complement(2067979..2068842)
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AA seq
287 aa
AA seq
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MLDKIRVQMSALSKSERKVAQHILASPEQAIHSSIATLARAAEVSEPTVNRFCRHLGTAG
FPDFKLQLAQALVKSPNWLSRDVQEDDSVERYSEKIFDSALAGLQRVREHLDLAALQQAV
SHLTHTDKITFFGLGASAVVAHDAFNKFLRFNLPVIWSDDVVMQRMSCINSRDKEVFVLI
SHTGRTRNMVELAQMAKANGSTVIAITSAGSPLAHEASLALLVDVPEDTDIYLPMVSRLA
QLTVIDLLATGFTLERGPAFRQNLKRVKEALKSSRYDKPAIADNDSV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttggataaaattcgggtgcagatgagtgcgctcagtaagtcagagcgtaaagtggca
caacatatccttgcttctccggagcaggcgatacattccagtattgctacgctggcacgg
gcggcggaagtgagtgagcccaccgtcaaccggttttgccgccatcttggcacggcgggt
tttcccgacttcaagcttcaacttgctcaggcgctggtcaagtcccctaactggctcagt
cgggacgtgcaggaagatgacagcgttgagcgttacagtgagaaaatattcgattctgcc
ctggccgggcttcagcgggtgcgggagcatctcgatcttgccgcgctgcagcaggccgtg
agccatctgacgcataccgataaaatcactttttttggtttaggtgcctccgctgtggtg
gcacacgacgccttcaacaagtttttacgcttcaacctgccggttatctggtcagatgat
gtggtgatgcagcgaatgagctgtatcaacagccgcgacaaagaggtgtttgttttgatc
tctcataccggccgtacccgcaacatggttgagctagcgcagatggcaaaggccaacggc
tcgaccgttatcgccattacctcagccggatcgccacttgcccatgaagcctcgctggcg
ctgctcgtcgatgtgcccgaagataccgatatctatctgccgatggtgtccaggctggct
caactcaccgtgatcgacctgctggcgaccggttttaccctggaacgggggcccgctttc
aggcagaacctgaagcgggtaaaagaggcgctaaagtcatctcgttacgacaaacctgcc
attgccgataacgatagcgtctga
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