Pantoea ananatis LMG 5342: PANA5342_2124
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Entry
PANA5342_2124 CDS
T01728
Symbol
yciM
Name
(GenBank) tetratricopeptide repeat-containing protein
KO
K19804
lipopolysaccharide assembly protein B
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
PANA5342_2124 (yciM)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_7
Zn_ribbon_LapB
TPR_14
TPR_16
TPR_12
TPR_1
TPR_8
TPR_6
ANAPC3
TPR_CcmH_CycH
ARM_TT21_N
TPR_11
NatA_aux_su
ARM_TT21_5th
TPR_21
ARM_TT21
TPR_NUP160_120_M
ARM_TT21_C
SPG48
DUF7178
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
CCF09517
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Position
2228955..2230124
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AA seq
389 aa
AA seq
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MLELLFLLLPVAAAYGWYMGRRSAQQDKQQESNRLSRDYVAGVNFLLSNQQDKAVDLFLD
MLKEDSGTVEAHLTLGNLFRSRGEVDRAIRIHQSLMESASLSYEQRLLAIQQLGRDYMAA
GLYDRAEDMFKQLTDETDFRIGALQQLLLIHQATSDWVQAIEVAERLVKLGKDKQKGEIA
HFYCELALQAMSSDDLDRAMTLLKKGESADRQSARVSIMMGRILMEKGEHAKAIEHLQRV
LDQDKELVSETLPMLETCFQRLNQPDAWAAFLKRCVEENTGAAAELYLSAILEQEQGAEA
AQNYINNQLQRHPNMRVFHRLMEFHLHEAEDGRAKESLMVLRDLVGEQIRTKPRYRCQKC
GFTAHALYWHCPSCRTWSSVKPIRGLDGQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgttagagctgctgtttctgttacttcctgtcgccgctgcctatggttggtacatgggc
cgccgaagcgcgcagcaggataagcaacaggaatcaaaccgcctgtctcgtgactacgtc
gcaggggtaaactttttactctccaaccagcaggataaagcggtcgatctgtttcttgac
atgctcaaggaagacagcggcacggttgaagcgcacctgacccttggcaacctgttccgt
tcgcgcggtgaggttgaccgcgccattcgaattcatcagtctttaatggaaagcgcgtcg
ctaagctacgaacaacgcttgctggccatccagcaactggggcgtgactatatggcagca
ggtctttatgaccgcgccgaagacatgttcaaacagctgacggatgagacagatttcagg
atcggtgcactgcaacagctgttgcttattcatcaggcaaccagcgactgggttcaggct
atcgaggtggctgagcggctggttaaactgggcaaagacaagcagaagggtgagattgcc
catttttattgcgaactcgcgctgcaggccatgagcagcgacgatctcgacagggcgatg
accctgttgaaaaagggggagtcagccgatcgtcagagcgcacgcgtctcgattatgatg
gggcgcatcctgatggagaaaggggagcacgccaaagctatcgagcatctgcagcgtgtt
ctggatcaggataaagagctggtcagtgaaacgctgccgatgttagaaacctgttttcag
cgtcttaatcagcccgacgcctgggccgcatttcttaaacgctgtgtggaagagaacacc
ggcgccgcggcggaactgtatctttccgcgattctggagcaggagcagggcgcggaagcg
gcgcaaaactacatcaataaccagttacagcgtcaccccaacatgcgcgtattccatcgt
ctgatggagtttcacctgcatgaagcggaggatggtcgtgctaaagagagcctgatggtg
ctgcgcgatctggtcggcgagcaaatccgcacgaaaccacgttatcgctgccagaaatgc
ggctttacggcccatgcgctctactggcactgtccgtcatgccggacctggtcatcagtc
aaaccgattcgcggactggatggacaataa
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