Pantoea ananatis LMG 5342: PANA5342_2411
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Entry
PANA5342_2411 CDS
T01728
Symbol
ytfR
Name
(GenBank) ABC transport system, ATP-binding protein
KO
K10820
galactofuranose transport system ATP-binding protein [EC:
7.5.2.9
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PANA5342_2411 (ytfR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plf02000
]
PANA5342_2411 (ytfR)
Enzymes [BR:
plf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.9 ABC-type D-galactofuranose transporter
PANA5342_2411 (ytfR)
Transporters [BR:
plf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
PANA5342_2411 (ytfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_22
RsgA_GTPase
AAA_23
TsaE
AAA_15
AAA_16
DUF2813
AAA_30
MMR_HSR1
nSTAND3
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
CCF09804
LinkDB
All DBs
Position
complement(2525386..2526906)
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AA seq
506 aa
AA seq
DB search
MTTHNEQPLLAISGVSKGFPGVKALDDVSFSLRKGEIMALLGENGAGKSTLIKVLTGVYT
RDSGTVTLNGQAISPHSTAEAQDIGIGTVYQEVNLLPNMSVADNLYIGREPRRFGMIDRK
RMVRDADALMRNYGFALDVTRPLGHYSVAMQQIIAICRAVDLSAQVLILDEPTASLDASE
VEMLFTLMTQLKNRGMSLIFVTHFLDQVYRITDRITVLRNGKFIATHDTATLPQIELVKL
MIGRELMATALQRQGGTLRSNQPVVSFEDYGKKGTIEPFSLQVRPGEVVGLAGLLGSGRT
ETAEVLFGIRRADRGTAKIKGKVEHIRTPAQASRLGMGFCPEDRKTDGIIGAASVRENII
LALQAQRGWLRPIKKREQQAIAERFIKSLGIRTPHAEQPVELLSGGNQQKVLLSRWLVTK
PQFLILDEPTRGIDVGAHAEIIRLIESLCADGLALLVISSELEELVGYADRVLIMRDLKQ
VAEIPLEQLSVAAIVNAIADGGTQHA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacacaacgaacaacctcttttagccatcagcggcgtcagtaaaggcttcccc
ggcgtcaaagcgctggacgatgtgtctttcagcctgcgtaaaggcgagatcatggcgctg
ttaggtgaaaacggcgccggaaaatccacactcataaaagtcctgaccggcgtttacacc
cgggacagcggcaccgtaacgttaaacggccaggcgatttcgccgcacagcaccgccgaa
gcccaggatatcggtatcggtacggtttatcaggaagttaacctgctgcccaacatgtcg
gtggcagataacctgtatatcgggcgtgaaccgcgtcgttttggcatgatcgatcgtaag
cgcatggttcgcgatgccgatgccctgatgcgtaattacggttttgcccttgatgtcacc
cggccccttggccactattcggtcgccatgcagcagatcattgccatctgccgggctgtc
gatctttctgcgcaggtcctgattctggatgaacctactgccagcctggatgccagcgaa
gttgaaatgctgtttaccctcatgacgcagctgaaaaatcgcggcatgagcctgattttc
gtcacgcattttctggatcaggtttatcgcatcaccgaccgcatcaccgtactgcgtaat
ggtaaattcatcgccacgcatgacacggcaacgctgccgcagattgaactggtgaaactg
atgattggccgtgagctgatggcgaccgcgctgcagcgtcagggcggcacgctacgcagt
aatcagcctgtggtgtcttttgaagattacggcaagaaaggcacgatcgagcctttcagc
ctgcaggtcaggcccggcgaagtggtggggctggccggactgctggggtccggacgcact
gaaacggccgaagtgttatttggtatccgtcgcgccgatcgcggtacggcaaagatcaaa
ggcaaagttgaacacattcgcacgcctgctcaggcctcacgcctgggcatggggttctgt
ccggaagaccgcaaaaccgacggtatcattggtgcggcctcggtgcgggaaaacattatt
ctggccctgcaggcgcagcgcggctggttacggccgattaaaaaacgggaacagcaggcg
attgccgaacgttttattaaaagtctgggtattcgcacgccgcatgcagagcagcccgtt
gagctgttatcgggcggcaatcagcaaaaggttctgctgtcacgctggctggtgacaaaa
ccgcagttcctgatcctggatgaaccgacgcgcggcattgatgtgggcgcgcatgcggaa
attatccgcctcatcgagtcgctgtgtgccgatggtctggcgctgctggttatctcttca
gagctggaagagctggtcggctacgccgatcgtgtattgatcatgcgtgatctgaaacag
gtggctgaaattccactggagcagctttcagtggcggcaatcgttaacgctattgctgac
ggaggtacgcagcatgcttga
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