KEGG   Pantoea ananatis LMG 5342: PANA5342_2559
Entry
PANA5342_2559     CDS       T01728                                 
Symbol
icmF3
Name
(GenBank) type VI secretion system, core protein
  KO
K11891  type VI secretion system protein ImpL
Organism
plf  Pantoea ananatis LMG 5342
Pathway
plf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:plf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PANA5342_2559 (icmF3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plf02044]
    PANA5342_2559 (icmF3)
Secretion system [BR:plf02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PANA5342_2559 (icmF3)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related VP16-like SpGH101_helical UVR
Other DBs
NCBI-ProteinID: CCF09952
LinkDB
Position
2670129..2672237
AA seq 702 aa
MRASFRLFLTHRLLWSFIGVTALSCLLWMLGPLITWNETRPLEPALHREIAVSTLYLLWI
VLQLIPAVYRAWYNSRLLDRLQVVESDDPAERQATEALLSQRFSEAAMRLKRTHFGRRQG
SLWARINANYLYQLPWYLMIGAPGAGKTTALLNAGLKFPLTDTFGNEAVRGVGGTRNCDW
WFTDSAVLIDTAGRYALQESQRARDASEWQSFINLLKRYRARQPINGVIMSISVADLLSD
SAEARFEQANALRDRLNELHQHTGIHFPVYIMVTKTDLLKGFMSYHGSLDKARRDAIWGF
TFPWDAGKPNKQDWHPHFDLQFTQLEQKLQLQLADQMTHERDLNERAECFLFPQEFSSLR
PLLSEYLDIVFSPRAETVAWNPRGLFFTSGTQEGLPFDRVMGELSRKLQLRQAGSHSIAA
WDRVNRSSPIPGNKGQSFFIRDLLSNLVFKESGLAGSNRRWEYRNQLLHWIGYGMLAGAL
VIMSGLWLTSYYQNQHYLQQVTARLPVISQQSQQVIHQPADNIFDLLPFLNNLVKLPVSD
QFSLDNPPLTMRAGLYRGNQVSDAAWALYQNALKSLLLPRVAQQITNLLRNDPGDDNEYS
RNALRAYQMLYQPRNYDGEFLRAWLLQNLQHSLPEKVSARDLQQLDWHLSQLLDQQIQSS
PYARDNALMMRKLADNLNNAGRDSTLLATAPRKAQRLTTHNP
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgcgcgcttcttttcgcttatttttaacgcatcgactgctgtggagctttatcggtgta
acggcactgagttgcctgttgtggatgctggggccgcttatcacctggaatgaaacccgt
ccgcttgaacccgccctgcaccgcgaaatcgccgtgagcacgctttatctgctttggatc
gtgcttcagttaatccctgcggtttaccgtgcctggtataacagtcgtctgctggatcgg
ctgcaggtggttgaaagcgacgatcccgccgagcgtcaggcgacggaagccctgctgagt
cagcgttttagcgaagcggccatgcgcctgaaacgcacccattttggccggcgtcagggc
agcctgtgggcacgcatcaacgcgaattatctttaccagcttccctggtacctgatgatt
ggcgcgccgggtgccggtaaaaccaccgcgttgcttaacgccggactgaagtttcccctt
accgatacttttggtaacgaggctgtgcgcggcgtcggcggaacacgcaactgcgactgg
tggttcaccgacagtgcggtattgatcgacacagccggacgttatgcgttacaggagagt
caacgcgcccgtgatgccagcgagtggcagagctttattaatctgctgaagcgctatcgt
gcccgacagccgatcaatggcgttatcatgagcatcagcgtcgcagatttgctgagcgac
tcggccgaggcgcgttttgagcaggctaacgccctgcgcgaccgcctgaacgaactgcat
cagcacaccggtattcacttccccgtgtatatcatggtgaccaagaccgatctgctgaaa
ggctttatgagctatcacggctcgctggataaagcccgacgcgatgccatctggggattc
acctttccctgggatgccggtaagcccaataagcaggactggcatccgcactttgacctg
cagtttacccagttagagcagaagctgcagctacagctggccgatcagatgacccacgag
cgcgatctcaatgagcgggcagagtgtttcctgtttcctcaggagttctcgtctctgcgc
ccgctgctcagcgaatacctggatattgttttttcaccccgcgctgaaaccgtcgcctgg
aatccgcgcggtctgttctttaccagcggcacccaggagggcttacctttcgacagagtg
atgggtgagctcagccgcaaactgcaactgcgccaggccggttcccattcgattgccgcc
tgggaccgcgtgaaccgcagcagccctattcccggaaataaaggccagagcttttttatt
cgcgatctgctgagcaatctggtgttcaaggagagtggtctggcgggcagcaaccgtcgc
tgggagtaccgcaatcagctgctgcactggattggctacggcatgctggccggcgcgctg
gtgatcatgagcggcttatggctgacgagttactatcagaaccaacactatctgcagcag
gttacggcgcgattgccggttatctcacaacaaagtcagcaggtgatacatcagcccgct
gataatatttttgatctgctaccctttctgaataacctggtgaagttacccgtgtccgac
cagttttctctcgataatccgccgcttactatgcgagccggtttatatcgtggaaaccag
gtcagcgatgcagcctgggcgctttatcaaaatgcgcttaagtctttattgctgccccgc
gtggcgcaacagatcaccaacctgctgcgtaatgacccgggggatgataacgagtacagc
cgaaatgcgctgcgtgcttatcagatgctgtatcagccgagaaattatgatggggaattc
ctccgcgcctggctgctgcagaatctgcagcattcgttaccggagaaggtcagcgcccgg
gatttgcagcagctggactggcacctgagtcagttgctcgatcagcaaattcagtcgtca
ccctatgcgcgcgacaatgcgctgatgatgcgcaagctggctgataacttaaataatgcg
ggtcgcgacagtaccctgctggccactgcgccgcgcaaagctcagcgcctgacgacgcat
aacccataa

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