Pantoea ananatis LMG 5342: PANA5342_2708
Help
Entry
PANA5342_2708 CDS
T01728
Symbol
trmU
Name
(GenBank) tRNA5-methylaminomethyl-2-thiouridylate-methyltransferaseTrmU
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PANA5342_2708 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_2708 (trmU)
Enzymes [BR:
plf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PANA5342_2708 (trmU)
Transfer RNA biogenesis [BR:
plf03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PANA5342_2708 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
Asn_synthase
QueC
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CCF10101
LinkDB
All DBs
Position
2838096..2839208
Genome browser
AA seq
370 aa
AA seq
DB search
MSDNCQKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAADDLADAQ
AVCDKLGIKLHKVNFAAEYWDNVFEHFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDL
GADFIATGHYVRRQDSDGRSHLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPEVR
RIAEELELITAKKKDSTGICFIGERKFREFLARYLPAQPGEIETVDGQVVGEHQGLMYHT
LGQRKGLGIGGMKESKDDPWYVVDKDVARNRLIVAQGGDHPRLMSVGLIAQQLHWVDRQP
LRAPLRCTVKTRYRQTDIPCEIIPQGDDKIEVRFDEPVAAVTPGQSAVFYLGDVCLGGGI
IEERLPWVAA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataactgccagaaaaaagtgatcgtcgggatgtccggcggcgtcgattcttcc
gtttccgcctggttactgcaacagcagggctatcaggttgaaggcctgttcatgaagaac
tgggaggaagacgatggcgaggagtattgtaccgccgctgacgatctggcggatgcgcaa
gccgtgtgcgacaaactgggtattaaactgcacaaagtgaattttgcggcggaatactgg
gataacgtctttgagcacttccttgaagagtacaaggccggtcgcacaccgaatcccgat
atcctgtgtaataaagaaattaagttcaaagcgtttctggagtttgccgctgaagatctg
ggcgcagactttatcgcaaccggtcactatgtccgtcgtcaggacagtgacggccgcagc
catctgctgcgcggactggatggaaacaaagaccagagctacttcctttatacgctcagc
cacgaacaaattgcccagagcctgtttccggtcggcgagctggaaaaaccagaagtccgc
cgcatcgctgaagagcttgaattaatcacggctaagaaaaaagattccaccggcatttgt
ttcatcggtgaacgcaagttccgtgaattcctggcgcgctacctgcccgctcagcccggt
gaaatcgaaaccgttgatggccaggttgtcggtgagcatcaggggctgatgtaccatacg
ctgggccagcgcaaagggctgggcatcggcggtatgaaagaaagcaaagacgatccctgg
tatgtggtagataaagacgtggcgcgtaaccgtttgatcgtggcgcagggtggcgatcac
ccgcgtctgatgtcggtcggcctcatcgcccagcaactgcactgggtcgatcgtcagccg
ctccgtgccccgctgcgctgtacggtgaaaacccgctatcgccagaccgatatcccctgc
gaaatcattccgcaaggcgatgacaaaattgaagtccggttcgacgaaccggttgccgcg
gtcaccccggggcagtctgcggtgttctaccttggcgatgtttgcctgggtggcggcatc
attgaagagcgtttgccttgggttgccgcataa
DBGET
integrated database retrieval system
