Pantoea ananatis LMG 5342: PANA5342_3116
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Entry
PANA5342_3116 CDS
T01728
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00020
Citrate cycle (TCA cycle)
plf00190
Oxidative phosphorylation
plf00650
Butanoate metabolism
plf00720
Other carbon fixation pathways
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
plf01200
Carbon metabolism
Module
plf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
plf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PANA5342_3116 (sdhA)
00650 Butanoate metabolism
PANA5342_3116 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PANA5342_3116 (sdhA)
00720 Other carbon fixation pathways
PANA5342_3116 (sdhA)
Enzymes [BR:
plf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PANA5342_3116 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
CCF10509
LinkDB
All DBs
Position
complement(3258266..3260032)
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AA seq
588 aa
AA seq
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MSLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HDDNWEWHMYDTVKGSDYIGDQDAIEYMCHVGPEAILELEHMGLPFSRLDDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNDDGAIVGC
TAICMETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMVEIREG
RGCDGPWGPHIKLKLDHLGAEVLESRLPGILELSRTFAHVDPIKEPIPVIPTCHYMMGGV
PTKVTGQALRVNEQGEDEVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGVHLL
ECLEEQGELREASQENIDAAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFREGDAM
REGLAELKEIRERLKSARLDDRSPDFNTQRIECLELDNLMETAYATAVAANYRTESRGAH
SRFDYPERDDANWLCHSLYVPQTESMTRREVNMQPKLRAAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaccagtaagagaatttgatgccgtggtgatcggcgcaggcggcgcgggtatg
cgcgcggcgttgcaaatctcccagtcgggccagacctgtgccctgttgtccaaagtcttc
ccgacccgttcccatacggtctccgcgcagggcggaattaccgttgcgctgggtaacacc
catgacgataactgggaatggcatatgtatgacaccgtcaaaggttccgactacatcggt
gaccaggacgcgattgaatacatgtgtcacgtcggtccggaagcgattctggaactggag
cacatgggcttgcccttctcccgtcttgatgacggccgcgtttatcagcgtccgtttggt
ggtcagtcgaaaaacttcggcggtgagcaggcggcgcgtactgccgcagcggccgaccgt
accggccacgcactgctgcatacgctgtatcagcagaacctgaaaaataaaaccactatc
ttctccgaatggtatgcactggatctggtcaaaaatgacgacggtgccatcgtaggctgt
acggcaatctgcatggaaaccggcgaaacggtttacttcaaagccaaggccaccattctg
gcgacgggcggtgcaggacgtatttatcagtccacgacgaacgcccacatcaataccggc
gacggtgttggcatggcgctgcgcgcgggcgtgcctgtgcaggatatggaaatgtggcag
ttccacccaaccggtatcgccggtgctggtgtactggtcaccgaaggctgtcgtggtgaa
ggcggttatctgctgaacaaacacggtgagcgtttcatggagcgctatgcgcctaacgcc
aaagaccttgccggtcgtgacgttgtggcccgttcgatgatggtggagatccgtgaaggt
cgtggttgcgacggtccatggggcccgcacatcaagctgaaactcgatcacctgggtgcg
gaagtgctggaatcgcgcctgccgggcatccttgagctgtcccgtacctttgctcacgtt
gacccgattaaagagccgattccggttatcccaacctgtcactacatgatgggcggcgtg
ccaaccaaagtcaccggtcaggcgctgcgtgtgaatgagcagggcgaagacgaagtgatt
cctggcctgttcgcggtgggtgaaatcgcctgcgtatcggtacacggggcgaaccgtctg
ggtggcaactcgctgctggacttggtggtcttcggtcgcgcggctggcgtgcatctgctt
gaatgtctggaagaacagggtgaactgcgtgaagccagccaggaaaacattgatgccgcg
atggcgcgtttcaaccgctgggaaaataacaccacgggtgaagatccggttgaaatccgc
aaggcgttgcaacgctgcatgcagaacaacttctcggtattccgtgaaggcgatgcgatg
cgtgaagggcttgctgaactgaaagagatccgtgagcgtctgaagtccgcgcgcctggat
gaccgctcacctgacttcaatacacagcgtattgagtgccttgagctggataacctgatg
gaaaccgcttatgccaccgcagtggcggccaactaccgcactgagagccgtggcgcacac
agtcgcttcgactatccggaacgtgatgatgccaactggctgtgccatagcctctatgtt
ccgcaaacggaaagcatgacgcgccgtgaggtgaacatgcaaccgaaactgcgtgcggcc
ttcccgccgaaagcgcgtacctactaa
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