Pantoea ananatis LMG 5342: PANA5342_3167
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Entry
PANA5342_3167 CDS
T01728
Symbol
rlpA
Name
(GenBank) rare lipoprotein A precursor RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plf01011
]
PANA5342_3167 (rlpA)
Enzymes [BR:
plf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PANA5342_3167 (rlpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
plf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PANA5342_3167 (rlpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
DUF6491
Motif
Other DBs
NCBI-ProteinID:
CCF10560
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All DBs
Position
3310859..3312022
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AA seq
387 aa
AA seq
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MRKDWLGVVLASMVLAACSTQEPQQQSAPPQPAYNGPVVEIPGVEPRYEPVNPSTNQDYS
VNGKNYRIIKNPANYSEVGLAAWYGEEAQGNRTATGETFDPDALTAAHPTLPLPSYVRVT
NLANGRQIVVRVNDRGPYTPGRIIDLSRAAGDRLNISNNSRVRVDYISVAPDGTLSGPGT
IGTVVAKQSYALPARPDLNGPVMSSPQGMSGGSQPIMNGSSQPQTAPAAEPEAQDISPVS
NATLQSNNAMGAPVQSSGFLGAPQPLPSGVLESSEPAASPPVAAAPVAAAPVAASAAASP
RQPAASQSASSLSGYVVQVSAINDAARARRLVNSLRQRFGVPGAVENAGNVYRVQLGGYK
TRAEAVALQQRLSSEGQSAAFVTTAGR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaggactggcttggcgttgtattggcttcaatggttttagctgcatgttctacc
caggaaccgcaacaacaaagtgcgccaccgcagcctgcctataacggcccggtggtagag
attcctggcgttgagcctcgttatgagccggtcaatccgtcgaccaatcaggactacagc
gtcaacggtaaaaactaccgtatcatcaaaaatccggccaactacagtgaagtggggctg
gccgcctggtacggtgaggaagcccagggtaatcgtactgcgacgggcgagacctttgat
cccgatgccctgacggctgcccatccaacgctgcccctgcccagctacgttcgcgtgaca
aacctggcaaacggccgccagattgtggtgcgggttaacgatcgcggcccgtatacgccg
ggacgcattatcgatctgtcccgtgcggcaggtgaccgcctgaatatctccaacaattcc
cgcgtgcgggttgattacatcagtgtcgcaccggatggcacgctttccggccccggcacc
atcggcaccgtggtcgcgaaacagagctatgccctgcctgcgcgtcccgacctgaacggt
ccggtcatgagcagcccacaaggcatgagcggtggcagtcaacccatcatgaacggtagc
agccagccgcagaccgccccggcggctgaacccgaggctcaggatatttcacccgtcagc
aatgcgacgctgcaaagcaataatgctatgggcgcgccagtgcaaagtagcggcttcctg
ggcgcgccgcagccgttacccagcggcgtgctggaaagcagtgagcccgctgccagcccc
cctgtcgcagccgcgcctgttgccgctgcgccggttgcggccagtgccgccgcatcaccc
cgccagcccgccgccagccagagtgcctcatccctttcaggctatgtcgttcaggtgagt
gccattaatgatgcagcacgtgcccggcggttagttaacagtttacgccagcgctttggc
gttcctggcgctgtggaaaacgcaggcaatgtgtaccgcgtgcagcttggtggttataaa
acccgtgcagaagccgtggccttacagcaacggctgagcagcgaaggccagagtgcggcc
ttcgttaccaccgcaggtcgttaa
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