Pantoea ananatis LMG 5342: PANA5342_3841
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Entry
PANA5342_3841 CDS
T01728
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_3841 (truB)
Enzymes [BR:
plf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PANA5342_3841 (truB)
Transfer RNA biogenesis [BR:
plf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PANA5342_3841 (truB)
Prokaryotic type
PANA5342_3841 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CCF11234
LinkDB
All DBs
Position
complement(4062986..4063930)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGMSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNLVQTRPVTFTQAELDTALDSFRGDIM
QVPSMFSALKHQGRKLYEYAREGITIEREPRPITVYALQFIRWQGNELELDVHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRVQVARYPFEKMVTLEQLQALQHRASETGEDLAQHLDPL
LLPMDSPASDYPAVNVSSDVAAYFKQGQPVHASQAPAQGLVRVTEGEEGKFIGMAEIAED
GRIAPRRLVVEYQN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtccatggcgtcttattgctggataaacca
caagggatgtcatccaacgatgtcctgcaaaaggtcaagcgtattttcaacgctaaccgt
gcaggacataccggcgcgctcgatcctctggccaccggcatgttgccgatttgcctgggg
gaagccaccaagttttctcagtatctgctggactccgataagcgctatcgtgtgattgcc
cgcctgggtgaacgcaccgatacctccgatgcggacggcaatctggtgcagacccgtcct
gtgaccttcactcaggcagaactcgacacggcgctggacagttttcgtggcgatatcatg
caggtgccttccatgttttctgcactgaaacatcagggcagaaaactgtatgagtacgca
cgtgaaggcatcaccatcgaacgtgaaccccgcccgattaccgtttatgcgctgcagttt
attcgctggcagggcaatgagctggagctggacgtccactgttccaaaggtacctacatt
cgcaccattattgacgatctgggcgagaagcttggctgcggtgcgcacgtcatcatgctg
cgccgggtacaggttgcccgttatccgtttgagaagatggtcacactggagcagctccag
gcactgcagcatcgcgccagtgagacaggtgaagatctggcgcagcaccttgatccgctg
cttctgccaatggacagcccggcgtccgattatccggcggttaacgtctcatccgatgtc
gccgcgtactttaagcagggccagccggttcacgccagtcaggcgccagcccagggctta
gtacgcgtcaccgaaggtgaagagggcaaatttatcggcatggctgaaattgccgaggat
ggccgaattgccccccgccgtttagtggtggagtatcagaattaa
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