Pantoea ananatis LMG 5342: PANA5342_3903
Help
Entry
PANA5342_3903 CDS
T01728
Symbol
groL
Name
(GenBank) 60 kDa chaperonin (groEL protein)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PANA5342_3903 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plf03019
]
PANA5342_3903 (groL)
03110 Chaperones and folding catalysts [BR:
plf03110
]
PANA5342_3903 (groL)
03029 Mitochondrial biogenesis [BR:
plf03029
]
PANA5342_3903 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plf04147
]
PANA5342_3903 (groL)
Enzymes [BR:
plf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PANA5342_3903 (groL)
Messenger RNA biogenesis [BR:
plf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PANA5342_3903 (groL)
Chaperones and folding catalysts [BR:
plf03110
]
Heat shock proteins
HSP60 / Chaperonin
PANA5342_3903 (groL)
Mitochondrial biogenesis [BR:
plf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PANA5342_3903 (groL)
Exosome [BR:
plf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PANA5342_3903 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PANA5342_3903 (groL)
Exosomal proteins of breast cancer cells
PANA5342_3903 (groL)
Exosomal proteins of colorectal cancer cells
PANA5342_3903 (groL)
Exosomal proteins of bladder cancer cells
PANA5342_3903 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CCF11296
LinkDB
All DBs
Position
complement(4119295..4120944)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DQAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGTLIAQAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELETPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMELEKAALEDLGQAKRVVINKDTTTIIDGVGEETTIQGRVTQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAQLTELRGQNEDQNVGIKVALRAMESPLRQIVSNAGEEPSVVANNVKAGDGNYGYNA
QTEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAGAGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgcacgcgtaaaaatgttgcgtggcgtg
aacgtactggcagatgcagtaaaagttaccctgggcccgaaaggccgtaacgtggttctg
gataaatcttttggtgcaccgaccatcactaaagatggtgtttctgttgcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaacgacgcggcaggcgacggtaccaccacggcaaccgtgctggcgcagtccatcatc
accgaaggcctgaaagccgttgcagcgggcatgaacccgatggatctgaagcgcggtatc
gaccaggcggtcatcgctgcggttgaagagctgaaaaaactgtctgttccttgctcagat
tccaaagctatcgctcaggtagggactatctctgctaactctgatgaaaccgtcggtacc
ctgatcgctcaggcgatggaaaaagtgggcaaagaaggcgtcatcaccgttgaagaaggc
accggcctgcaggacgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccgtacttcatcaacaagccagaaacaggtgccgttgagctggaaacccctttcatc
ctgctggctgacaagaagatttctaacatccgtgaaatgctgccagtgctggaagccgtt
gcgaaagcaggcaaaccactgctgatcatcgcggaagacgtagaaggcgaagcgctggcg
acgctggtggtgaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcaccgggc
ttcggcgaccgccgtaaagccatgctgcaggatatcgctatcctgaccggcggtaccgtg
atctctgaagagatcggtatggagctggaaaaagcagcactggaagatctgggccaggcg
aagcgtgtcgtgatcaataaagacaccaccaccatcatcgatggcgtgggtgaagaaacc
actattcagggtcgtgtcactcagattcgtcagcagattgaagaagccacctctgactac
gacaaagaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgccgttctgaaa
gtgggcgcagcaactgaagttgaaatgaaagagaaaaaagctcgcgttgaagatgccctg
cacgcaacccgtgctgcggtcgaagaaggcgtggttgcaggtggtggtgtggcgctggtt
cgcgttgcagcacagctgacagaactgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgtttctaacgccggcgaa
gagccttctgttgtggcgaacaacgtgaaagcaggcgacggtaactacggttacaacgcg
cagactgaagaatacggcaacatgatcgacttcggtattctggacccaaccaaagtgacc
cgttctgctctgcagtacgcggcatcggttgctggcctgatgatcaccaccgaatgtatg
gtcactgacctgccgaaaggcgatgcgccagacttaggtgcaggcgctggcggtatgggt
ggcatgggcggtatgggcggcatgatgtaa
DBGET
integrated database retrieval system
