Pantoea ananatis LMG 5342: PANA5342_4136
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Entry
PANA5342_4136 CDS
T01728
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_4136 (soxR)
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PANA5342_4136 (soxR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
HTH_17
NinG
LPD22
Motif
Other DBs
NCBI-ProteinID:
CCF11529
LinkDB
All DBs
Position
complement(4362646..4363131)
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AA seq
161 aa
AA seq
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MKKDRNYPKPVLTPGEVARRSGVAVSALHFYESKGLIFSTRNSGNQRRYSRDVLRRVAII
KIAQRIGIPLASVSDSLENMPADKRMSAQEWGNLTQHWRDELDKRIETLTRLRNDLDGCI
GCGCLSMRDCPLRNPGDLLGQQGSGAVLLDPEQDGSLHKTR
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagatcgcaattacccaaaacccgtgctgacaccgggcgaagtggcgcgccga
agcggcgtcgccgtttctgcactgcacttttatgaaagcaaagggctgattttcagcacc
cgcaatagcggaaaccagcggcgttacagccgtgatgtgctgcgacgggtggccattatt
aaaattgcacagcgcattggtattccgctcgccagcgtcagtgacagtcttgagaacatg
ccggcagataagcggatgtctgctcaggaatggggcaatctgacgcagcactggcgcgac
gaactggataagcgcatcgaaacgctgacgcgcctgcgtaacgatctggatggctgcatt
ggctgtgggtgtttatcaatgcgtgactgcccgctgcgcaaccctggcgacctgctgggc
cagcagggctctggcgcggtattgctcgatcctgagcaggatggttccctgcataagaca
aggtga
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