Pantoea ananatis LMG 5342: PANA5342_4206
Help
Entry
PANA5342_4206 CDS
T01728
Symbol
thiC
Name
(GenBank) Thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00730
Thiamine metabolism
plf01100
Metabolic pathways
plf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PANA5342_4206 (thiC)
Enzymes [BR:
plf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PANA5342_4206 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
CCF11599
LinkDB
All DBs
Position
4441355..4443277
Genome browser
AA seq
640 aa
AA seq
DB search
MSTAKTTRREQRAQAQEFIDSLQGGSAFPNSKRIWLTGSRDDIRVPMREIQLSPTLTSGS
KEAPVYEENEPVPVYDTAGAYGDPAAQIDVHRGLDKLRARWIEERNDSENLVQISSAYTQ
QRLADDGLDHLRFEHLPTPRRAKAGHCVTQLHYARRGIITPEMEFIALRENMGRERIRGE
VLLQQHPGHSFGAHLPENITPEFVRQEVAAGRAIIPANINHPESEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQA
LEKVNGVAEDLNWEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIM
AKWCLSHHRESFLYEHFRDICEICAAYDISLSLGDGLRPGSIQDANDEAQFAELHTLGEL
TKIAWEYDVQVMIEGPGHIPMQMIRRNMTEQLEHCHEAPFYTLGPLTTDIAPGYDHFTSG
IGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNA
MSKARFEFRWEDQFNLALDPHTARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRD
YAARQEAEAQAIEVGMAKMSDHFRERGGELYHPATAIKEE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgctaaaacgacccgtcgcgaacaacgtgctcaggcacaggaattcattgac
tctcttcagggcggcagcgccttccctaattcaaaacgtatctggcttaccggcagccgc
gatgatatccgtgtcccaatgcgggaaattcaactcagccctaccctgaccagcggcagt
aaagaagcgccggtttatgaggagaatgagcccgttccggtttacgatacggccggtgcc
tatggcgatcccgccgcacaaatcgacgtgcatcgggggctggataaactgcgggcgcgc
tggattgaagagcggaatgacagcgaaaatctggtgcaaatcagctctgcctacacgcaa
cagcggctggccgatgacggcctggatcacttacgttttgaacacctgcccacaccacgc
cgtgcaaaggcaggccactgcgttacccagctccattatgctcgtcggggcataattacg
ccggagatggagtttatcgcgctgcgggaaaatatgggccgggaacgcatccgcggcgag
gtgctgctgcagcagcatccggggcacagctttggcgcccatctgccagaaaatattacc
cctgagtttgtgcgtcaggaagtggctgccgggcgcgctattattccggcaaatattaac
catcccgaatccgaacccatgatcatcgggcgtaactttctggtgaaagtgaatgccaat
atcggcaactcagccgtgacctcctcgattgaagaagaggttgaaaagctggtgtggtca
acgcgttggggcgccgataccgtcatggatctttccaccggccgctatatccacgaaacc
cgtgaatggattttgcgtaacagcccggtgcctatcggtacggtaccgatctatcaggcg
cttgagaaagttaacggtgtggcagaagatctgaactgggaaattttccgcgacacattg
ctggaacaggccgagcagggtgtggattattttacgattcatgcaggcgtgctgctgcgc
tacgtgcccatgaccgcgaagcgcctgactgggattgtctcgcgtggtggttccattatg
gcgaagtggtgcctgtcgcatcacagagagagcttcctgtatgagcacttccgcgacatc
tgtgaaatttgtgcggcctacgacatctcattatcactgggtgacggcctgcgtccggga
tcgattcaggatgccaatgacgaagcgcagtttgcggaactgcacaccttaggtgagctg
acgaaaattgcctgggaatacgacgtgcaggtgatgattgagggccccggccatattccc
atgcaaatgatccgtcgcaacatgaccgaacaactggaacattgccatgaagcgccgttt
tacactctgggccccctcaccactgatattgctccgggttacgatcactttacctccggc
attggtgccgcgatgattggctggttcggctgcgccatgctgtgctacgtcacgcccaaa
gagcatttaggtctgccaaacaaggaagatgttaaacagggcttaatcacgtacaagatc
gccgcgcacgcagccgatctggccaagggtcatccgggcgcgcagatccgcgacaatgcg
atgtccaaagcacgttttgagtttcgctgggaagaccagtttaatcttgcactggatccg
catacggcccgggcttaccacgatgaaaccctgccgcaggagtccggtaaggtggcccac
ttctgctctatgtgcggccccaaattttgctcaatgaaaattacccaggaagtgcgtgac
tacgccgcaaggcaggaagccgaagcccaggcgattgaggtggggatggcgaaaatgtct
gatcattttcgtgagcgcggcggtgagctgtatcaccctgcgaccgcaataaaggaggaa
taa
DBGET
integrated database retrieval system
