Pantoea ananatis LMG 5342: PANA5342_4226
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Entry
PANA5342_4226 CDS
T01728
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00071
Fatty acid degradation
plf00280
Valine, leucine and isoleucine degradation
plf00310
Lysine degradation
plf00362
Benzoate degradation
plf00380
Tryptophan metabolism
plf00410
beta-Alanine metabolism
plf00640
Propanoate metabolism
plf00650
Butanoate metabolism
plf00907
Pinene, camphor and geraniol degradation
plf00930
Caprolactam degradation
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
plf01200
Carbon metabolism
plf01212
Fatty acid metabolism
Module
plf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PANA5342_4226 (fadB)
00650 Butanoate metabolism
PANA5342_4226 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PANA5342_4226 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PANA5342_4226 (fadB)
00310 Lysine degradation
PANA5342_4226 (fadB)
00380 Tryptophan metabolism
PANA5342_4226 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PANA5342_4226 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PANA5342_4226 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PANA5342_4226 (fadB)
00930 Caprolactam degradation
PANA5342_4226 (fadB)
Enzymes [BR:
plf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PANA5342_4226 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PANA5342_4226 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PANA5342_4226 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PANA5342_4226 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CCF11619
LinkDB
All DBs
Position
4474389..4476572
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AA seq
727 aa
AA seq
DB search
MLYQGANLTLNQLDDGIVELVFDAPGSVNKLDTQTVASLGEAIAVLEQHADLRGVLLSSA
KPAFIVGADITEFLALFDAPTEKLSQWLTFANSIFNRLEDLPVPTIAAIDGYALGGGCEC
VLATDLRVATPTARLGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIDGMAALR
LGLVDAVVSPDKLRDAALTMLKAAASDGSWRARRAPKLAPLKLSPVEAAMSFTIAKGMVM
QTAGKHYPAPLTAVKTIEAAAALGRDDALKLETAAFVPLAQSDVARALVGIFLNDQYIKG
LAKKRSSENGAPKQAAVLGAGIMGGGISYQSAWKGVPVKMKDIHPQALTLGMNEASKLLN
KQLERGKIDGNRLAAVIATIQPTLDYAGFDQADVVVEAVVENPQIKASVLAETEKHMRSD
AILASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVVRGEKTSEATLGKVVAWA
SKMGKTPVVVNDCPGFFVNRVLFPYFAAFGMLLRDGADFRQIDKVMEKQFGWPMGPSWLL
DVVGIDTAHHAQSVMADGFPQRMKKDYRDAIDILFEAKRFGQKNGKGFWRWEEDKKGKPK
KVSDPEVDALLEPACQPKRIFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNVVDQAKRYTALGGLYELPALLSEKARQHESWYPAVKPID
EAAFRSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgctaacctcactcttaatcagttggacgacggcattgtcgagctg
gtgtttgatgcccccggctccgttaataagctggatacacaaaccgttgccagcctcggc
gaagcgattgctgtgctggagcaacacgccgatctgcgcggcgtgcttctgagctcagct
aaacccgcctttatcgttggggctgacatcaccgaattccttgcgctttttgacgcgcca
acggaaaagctgagccagtggctgacgttcgcaaacagcatttttaatcgtctggaagat
ttacccgttcccaccatcgccgcgatcgatggctacgcgctgggcggtggctgtgaatgt
gttctggcgacggacttacgggttgccacgccaaccgcccgcctgggcttacctgaaacc
aagctgggcatcatgccgggttttggcggcagcgttcgcctgcctcgcctgttgggtgct
gacagcgcgctggaaatcattgcggcaggtaaagatattgatggtatggctgcgctcagg
ctgggtctggtcgatgcagttgtcagccctgataaactgcgcgatgcagcgctgacgatg
cttaaagcggcagccagtgatggcagttggcgggcacgtcgcgcccctaaattagccccg
ttaaagctgagccctgtcgaggccgcaatgagctttacaatcgctaaaggcatggtcatg
caaacggccggaaaacattatcctgcgccgctcaccgccgtgaagacgatcgaggccgca
gccgcattaggacgtgacgatgcgttaaaactggaaacggcggcgtttgttccgttggcg
caatcggatgtggcccgcgcgctcgtcggaattttcctcaacgatcagtacattaaaggg
ctggcaaaaaaacgcagcagcgaaaatggtgcgccgaagcaggctgccgtgctgggcgcc
gggattatgggtggcggcatcagctatcagtcggcgtggaaaggtgtgccggtcaagatg
aaggatattcatccgcaggcgctgaccctgggcatgaacgaagccagtaagcttctgaac
aagcagctggagcgaggtaagatagacgggaataggctggctgccgtcattgccaccatt
caacccacgctggattatgccggatttgatcaggccgatgtcgtggtcgaagccgtggtc
gaaaatccacagatcaaagccagtgtgctggctgaaacagaaaagcatatgcgcagtgat
gccatcctggcctcgaatacctctacgatccccatcagccagctggcgcaggcactgcag
cgtcccgaaaacttttgcggtatgcacttctttaatccggttccccgtatgccgctggta
gaagtggttcgcggagagaaaaccagtgaagcgacgttgggtaaagtcgtggcatgggcc
agcaagatgggcaaaacccctgtcgtggtgaatgactgcccaggcttcttcgtaaaccgt
gttctgttcccttactttgccgcgttcggcatgttgttgcgcgatggtgcggatttccgc
caaatcgataaagtgatggaaaaacagtttggctggccgatgggcccttcctggctgctg
gatgtcgtagggattgataccgcacatcatgcgcaaagcgtgatggcggatggtttccca
cagcgtatgaaaaaggactatcgcgatgctatcgatattctgtttgaagcaaaacgcttt
ggtcagaaaaacggtaaaggcttctggcgttgggaagaagacaaaaaagggaaacctaaa
aaagtctctgatcccgaggtcgatgcgctgcttgaacctgcctgccagcctaagcggatc
ttcagtgatgaagaaatcctgaaccgcatgatgttgccaatgctgaatgaagttgtccgc
tgtctggaagagaagattattgcttcacctgccgaggcagacatggcgctggtgtacggc
ctgggattcccgccattccgtggtggggctttccgttatctcgacacgctggggaacagt
aatgtcgtggatcaggcgaaacgctatacggctctgggcggcctgtatgagctgcctgcc
ctgctgtcagaaaaagcgcgccaacatgaaagctggtaccccgccgtcaaaccgattgat
gaagccgcgttcagaagcgcctga
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