Pantoea ananatis LMG 5342: PANA5342_4258
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Entry
PANA5342_4258 CDS
T01728
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf03420
Nucleotide excision repair
plf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PANA5342_4258 (uvrD)
03430 Mismatch repair
PANA5342_4258 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plf03400
]
PANA5342_4258 (uvrD)
Enzymes [BR:
plf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PANA5342_4258 (uvrD)
DNA repair and recombination proteins [BR:
plf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PANA5342_4258 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PANA5342_4258 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
AAA_22
Beta-prop_WDR5
Motif
Other DBs
NCBI-ProteinID:
CCF11651
UniProt:
A0ACE3JNY7
LinkDB
All DBs
Position
complement(4508018..4510180)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNILVDEFQDTNNIQYAWIRMLAGDS
GKVIIVGDDDQSIYGWRGAQVENIQRFLKDFPGADTIRLEQNYRSTNNILKSANALIANN
NGRLGKELWTDGSDGEPISVYCAFNELDESRFVVNRIKAWMENGNALADCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLMANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTAREKQMTLWQATRELLQSRALAGRAASALQRFCELVDSLASETVDMPLHVQ
TDRVIKDSGLWIMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMMKLTLTYAETRRLYGKEVYHRPSRFIGELPEACIEEVRLRASVTRPVSHQRMG
TPISKNDTGFALGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgacggtttgaatgacaaacagcgcgaggccgttgcggcg
ccgcgcagtaacctgctggtgctggcgggcgcgggcagcggaaaaacacgcgttctggtg
caccgcatcgcctggctgctgtcggtagaaaactgctccccatactccattatggccgtg
acctttaccaacaaggcggccgcagagatgcgccaccgtattgagcagctcattggtacc
agccaggggggaatgtggataggcacgttccacggtctggcacaccgcctgctgcgcgcg
catcatcttgacgcaggcctgccgcaggatttccagatcctcgacagtgaagaccagctg
cgcctgctcaagcgcctgattaaggcgatgaacctggatgagaagcagtggccggcgcgc
cagggcatgtggtacatcaacggcaagaaagatgaaggtttgcggcccaagcatattgaa
agctacggcaatccggtcgaacaaacctggctgcggatatatcaggcctaccaggaagcc
tgcgatcgcgccgggctggtcgactttgctgaactgttgctgcgtgctcacgagctgtgg
ttaaacaaaccccatatcctgaatcattaccgtgagcgcttcagtaacattctggtggat
gagtttcaggataccaacaatattcagtacgcctggattcgcatgctggcgggcgacagc
ggcaaagtgattatcgtgggtgacgacgatcagtcaatttacggctggcgcggtgcgcag
gtcgaaaacattcagcgctttttaaaggattttcccggcgcggataccattcgcctggag
caaaactaccgctcgaccaacaacattttgaagtcagcgaatgccctgatcgccaataac
aacggccgactggggaaagaactgtggactgacggcagcgatggtgagcccatttcggtt
tactgcgcctttaacgagctggatgaatcccgctttgtggtcaaccgtatcaaggcctgg
atggaaaacggcaatgcgctggcggattgcgccatcctgtatcgcagcaatgcccaatcg
cgtgtgctggaagaagccctgctacaggccagcatgccgtaccgtatctatggcggtatg
cgctttttcgaacgtcaggaaatcaaggacgcgctggcttatctgcgactgatggccaac
cgcaacgacgacgccgcctttgagcgcgtggtgaatacgccaacgcgtggtgtgggcgac
cgcacgctggatgtggtgcgtcagacggctcgggaaaagcagatgaccttatggcaggca
acgcgcgagctgcttcagtcgcgcgccctggccggtcgtgcggcctctgcgctgcaacgc
ttctgtgagttagtggattcgctggcaagcgaaaccgtggatatgccgctgcacgtgcag
accgacagagtcatcaaggattctggcctgtggatcatgtacgagcaggaaaagggtgaa
aagggccaggcccgtatcgaaaacctggaagaactggtgacggcaacgcgccagttcagc
taccaggatgaagacgaagatttgatgccgctgcaggcattcctttctcatgcggctctc
gaagccggggaaggccaggcggacaaatggcaggatgcggtgcagctgatgacgttgcac
tccgcgaaaggcctggagtttagccaggtgtttattgtcgggatggaagagggcatgttc
ccgagccagatggcgctggatgaaggcgggcgactggaagaagagcgtcgcctggcttac
gtcggcgtcacgcgtgccatgatgaagctgacgctgacctatgcggaaacccgtcgtctt
tacggtaaagaagtctaccatcgaccttcacgttttattggcgaactgcctgaagcctgt
attgaagaagtccgtttacgcgccagtgtgacgcgaccggtcagtcatcagcgcatgggc
acaccgatcagcaaaaacgacacgggattcgccttggggcaacgcgttcgccacgccaaa
tttggtgaaggcactattgtgaatctcgaaggcagcggagaacacagccgcttgcaggtg
gcgtttcagggccaggggatcaagtggctggtggccgcctacgctaaactggaaaccgtc
tag
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