Pantoea ananatis LMG 5342: PANA5342_p10173
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Entry
PANA5342_p10173 CDS
T01728
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator (Rut operon repressor)
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_p10173 (rutR)
Transcription factors [BR:
plf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PANA5342_p10173 (rutR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
CCF11904
LinkDB
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Position
pPANA10:complement(155389..156165)
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AA seq
258 aa
AA seq
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MFLNNAYDDSRLNAYLLCFWPCCVYQGNVVKPLSENPGSDAGENLAAKTPSKSVTRRSRA
VAAKRGAIMAAALEFFSLYGFHGTRLEQVAERADVSKTNLFYYFPSKEDLYIAVLKGLLD
IWLAPLKALQSDQHPLEAIREYIRLKLCVSRDHPQASRLFCLEMVQGAPLLKQELGGSLK
TLVEDKSDVIRGWIKDELIAPIDPMQLIFMLWATTQHYADFGVQVEAITGKTLSDPVFFE
QTVKSVQHIITEGIQIRA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttaaataacgcgtatgacgatagtcgccttaatgcctatttgttatgcttttgg
ccttgttgtgtgtatcagggaaatgttgtgaagccattgtccgaaaacccgggttctgac
gccggagaaaacctcgccgcgaaaacgccatcgaaatctgtgacgcgacgttcgcgagcg
gttgctgccaaacgtggcgctatcatggccgctgcactggaattcttctcactgtatggc
tttcacggcacccgtcttgagcaggttgctgaacgcgcggatgtctcgaaaaccaatctg
ttctactactttccctcgaaagaagatttatacattgcggtgctcaaagggctgctggat
atctggctggcaccgcttaaagcactgcagtccgatcagcatcctctggaagcaatacgg
gaatatattcgtctgaagctttgcgtctcccgtgaccatcctcaggcctcaagattattt
tgtctggagatggttcagggcgcaccgctgctgaaacaggagctgggcggcagcctgaaa
acgctggtggaggataaatcggacgtgattcgcggctggattaaagatgagttgatcgca
cccatcgatccgatgcagttgatttttatgctgtgggccaccactcagcattacgcagat
tttggggtacaggttgaggcgattaccggtaaaacactcagcgatcctgtgttttttgaa
caaacggtgaagagtgtccagcacatcatcaccgaagggattcagattcgggcgtaa
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