Paucimonas lemoignei: NCTC10937_00102
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Entry
NCTC10937_00102 CDS
T05492
Symbol
algB
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_00102 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plg02022
]
NCTC10937_00102 (algB)
Two-component system [BR:
plg02022
]
NtrC family
KinB-AlgB (alginate production)
NCTC10937_00102 (algB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
VpsR
Mg_chelatase
cREC_REC
AAA_22
AAA_2
AAA_19
AAA_16
MCM
Xre-like-HTH
HTH_23
HTH_29
DUF1858
nSTAND3
HTH_50
DUF815
IstB_IS21
HTH_17
Motif
Other DBs
NCBI-ProteinID:
SQF93493
LinkDB
All DBs
Position
1:complement(103106..104452)
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AA seq
448 aa
AA seq
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MEAATENQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQADTLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEIRKPKDGLDSHSPSMMAILETARQVAGTDANILILGESGTG
KGELARAIHGWSKRAKKSCITINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRNGRF
REDLLYRLNVITLNLPALRERTEDILTLADRFLARFVKDYARPARGFSEEAKTALLNYRW
PGNIRELRNVIERASIICPQERVEVAHLGMAEQPTNNAPRVGAALSLDQLEKAHIGAVLA
TSETLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagccactgagaatcagggccgtattctgcttgtggatgacgaatccgcgatc
cttcgcacgttccgttattgcctggaagacgaaggctatagcgtcgctaccgccaacagc
gcagcccaggcggatacgttgctgcaacgccaggtcttcgacctgtgctttctggatctg
cgcctgggcgaagacaatggcctggacgtactggcgcaaatgcgcgttcaggcgccgtgg
atgcgcgtcgtgatcgtgacggcacattcggctgtggacaccgctgtagatgccattcag
gcaggcgccgctgactatctggtcaagccttgcagcccggaccagctacgcctggctacc
gcgaaacaactggaagtacgccaactgtcggcgcgtctcgaggcccttgaaggtgagatt
cgcaagcctaaagacggcctggactcccacagcccgtcgatgatggcgattctggaaacg
gcccgccaagtggctggcacagacgccaacatcctgatcctcggcgagtccggcaccggt
aaaggcgagctggcccgtgcgattcatggctggagcaagcgcgccaagaagtcgtgcatc
accattaactgcccgtcgctgacagctgagttgatggaaagcgagctgttcggtcacagc
cgcggtgcatttaccggcgccagtgagagcactctgggccgggtgaaccaggccgatggc
ggcacgctgtttctcgacgagatcggcgactttcccctcacgttgcagcccaagttgttg
cgtttcatccaggacaaggaatacgagcgtgtaggcgacccggtcacccgtcgcgcagac
gtgcggattctcgccgccaccaacctcaatcttgaagacatggtgcgtaacgggcgtttc
cgcgaagacttgctctatcgcctgaacgtcatcaccttgaatttgcctgccctgcgtgaa
cgcaccgaagacatcctgaccctggcggaccgcttcctggcgcgtttcgtcaaggattac
gcccgcccggcacgggggttcagcgaggaagcgaagaccgcgctgctcaattaccgctgg
cccggcaacatccgcgagctgcgtaacgtgattgaacgggccagcatcatttgcccgcaa
gagcgggtcgaggtcgcgcatttgggcatggccgagcagccgaccaacaatgcacctcgc
gttggcgcagccttgagcctggaccagttggaaaaagcccacatcggcgccgtcctggcc
accagcgagacgctggatcaggccgccaagaccttggggattgacgcttccacgctgtat
cgcaaacgcaagcagtacaacctatga
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