Paucimonas lemoignei: NCTC10937_00141
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Entry
NCTC10937_00141 CDS
T05492
Symbol
fecI_1
Name
(GenBank) sigma-24 (FecI)
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_00141 (fecI_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_00141 (fecI_1)
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10937_00141 (fecI_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_29
HTH_28
HTH_11
HTH_Tnp_ISL3
HTH_36
GerE
HTH_24
HTH_7
DUF6362
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
SQF93573
LinkDB
All DBs
Position
1:complement(142093..142593)
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AA seq
166 aa
AA seq
DB search
MPSHHSNMRTLYIDHHGWLNAWLRSRLGNAADAADLAQDTFVRLLNRHELLELKAPRAFL
RTVARGIVIDHWRREELERAYLEAIAHQPCHETPSPESRELVFELLESIAKMLDGLKPKV
RQAFLLAQCEGVPYKQIAEQMGVSLRSVERYIADALYHCYLLRYAP
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcatcacagcaacatgcgtacgctctatatcgatcatcacggctggctcaat
gcctggctgcgtagccggttggggaatgccgccgatgcggcggatctggcgcaagacacc
tttgtccgcctgctcaatcggcacgagttgctggagctgaaggcgccgcgagccttcctg
cgcaccgtcgccagagggatcgtcatcgaccactggcgccgcgaagaactggagcgcgcc
tacctcgaagccatcgcccatcagccctgtcatgaaacgccttcgccagagtccagggag
ctggttttcgagctgctggaaagcatcgccaaaatgctcgacggcttgaaacccaaggtt
cgtcaggcgtttttgctcgcccagtgcgaaggcgtgccctataaacagatcgccgagcaa
atgggtgtctcattgcgttcggttgagcgctatatcgccgatgcgctgtatcactgttat
ctgcttcggtatgcgccatga
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integrated database retrieval system
