Paucimonas lemoignei: NCTC10937_00251
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Entry
NCTC10937_00251 CDS
T05492
Symbol
dctD_1
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_00251 (dctD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plg02022
]
NCTC10937_00251 (dctD_1)
Two-component system [BR:
plg02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
NCTC10937_00251 (dctD_1)
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_50
AAA_2
FleQ
HTH_8
AAA
DUF6716
HTH_43
HTH_35
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SQF93786
LinkDB
All DBs
Position
1:complement(266536..267909)
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AA seq
457 aa
AA seq
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MTAIDSKIQVVLIDDDPHLRQALSQTLDLAGLKVLTLPEANGLAARIERDWPGVVVSDIR
MPGMDGLELLSDLHGRDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDSLLDSVR
RALALRRLVLDNRSLRLALSDRQQLSARLVGQSAPMLRLRQQIGALAATKADVLILGETG
AGKEVVARALHDLSNRRTGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFA
NGGTLFLDEIESMSMDVQVKLLRLLQERVVERLGGNQQIALDIRVIAATKEDLRQAADQG
RFRADLYYRLNVAPLRIPPLRERGEDALMLFQHYADAASMRHGLPKHELQPAQRALLLRH
SWPGNVRELQNAAERFALGLELALEGNEVPVVPTITGGLSEQVESFERALIAAELTRSHT
SVRSLAEALGLPRKTLHDKLRKHGLSFGGSADEPNEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccatcgacagcaagatccaggtagtgctgatcgacgacgacccgcacttgcgc
caggccctgagccagacgctggacctggctgggctgaaagtcctgacgctgcccgaggcc
aatggcctggccgcgcgcatcgagcgggactggcccggcgtggtggtcagtgacattcgc
atgccgggcatggatggcctcgaactgctcagtgatctgcatggccgcgatcccgaactc
ccggtgttgttgatcaccggccacggcgacgtgcctctggcagtccaggcaatgcgcgcc
ggggcgtatgactttctggaaaagccgttcgccagtgattcgctgctcgacagcgtgcgt
cgagccctggccctgcgccgcctggtgctggataaccgcagcctgaggctcgccctgagc
gaccgccagcagttgagtgcgcgcctggttggccagtcggcgccgatgctgcgcttgcgt
cagcagatcggtgcgttggcggccaccaaggcggatgtgttgatcctcggtgaaaccgga
gcaggcaaggaggtcgtggctcgggcgctgcatgatctgtccaaccgccgcaccgggcca
ttcgtggcgatcaacgccggtgcgctggccgagtcggtggtggaaagcgaactgttcggc
catgagccgggggcgtttaccggcgcccagaagcgtcgcattggcaagttcgagtttgcc
aacggcggcacgctgttcctcgacgaaatcgaaagcatgagcatggacgtacaggtcaaa
ctgctgcgtttgctgcaagagcgggtggtcgaacgtctgggcggcaaccaacagatcgcg
ctggatatccgggtgatcgccgccaccaaggaagacttgcgtcaggcggcggatcagggc
cgtttccgggccgacttgtactaccggctgaacgtcgcgccgctgcgcatcccgccgctg
cgtgaacgtggcgaagatgcgctgatgctgtttcagcactacgcggacgcggccagcatg
cgccacgggctgcccaagcatgagctgcaacctgcgcaacgcgccctgctgctgcgtcac
tcgtggcccggcaatgttcgcgaactgcaaaatgccgccgaacgctttgctttgggcctg
gaactggccctggaaggcaacgaagtcccggtggtgccgaccattaccggaggcttgagc
gagcaggttgagagtttcgagcgcgccttgattgccgccgagctgactcgctcacacacg
tctgtacgcagcctggccgaagccttgggcctgccgcgtaaaaccctgcacgacaaactg
cgtaaacacggcctgagctttggcggcagcgcagatgagccgaatgaagaatga
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