Paucimonas lemoignei: NCTC10937_00254
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Entry
NCTC10937_00254 CDS
T05492
Symbol
rmlC_1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
plg
Paucimonas lemoignei
Pathway
plg00521
Streptomycin biosynthesis
plg00523
Polyketide sugar unit biosynthesis
plg00541
Biosynthesis of various nucleotide sugars
plg01100
Metabolic pathways
plg01110
Biosynthesis of secondary metabolites
plg01250
Biosynthesis of nucleotide sugars
Module
plg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC10937_00254 (rmlC_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC10937_00254 (rmlC_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC10937_00254 (rmlC_1)
Enzymes [BR:
plg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC10937_00254 (rmlC_1)
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Motif
Pfam:
dTDP_sugar_isom
CCDC92
Motif
Other DBs
NCBI-ProteinID:
SQF93789
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All DBs
Position
1:complement(270775..271323)
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AA seq
182 aa
AA seq
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MNVIACDIPDVLILEPRVFGDERGFFYESFNAKAFGDATGMRHLKFVQDNHSRSARNVLR
GLHYQIENAQGKLVRVTLGEVLDIAVDIRRSSPTFGRWVGVRLSAENFRQLWVPPGFAHG
FVVLSDYAEFLYKTTDYYTPAAERCIRWDDPDLAIDWELEGVPQLSAKDQNGVAFKEADL
FP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgtgattgcgtgcgatatccccgacgtactcatcctggaaccgcgggtgttcggt
gatgagcggggctttttctatgaaagcttcaatgccaaggcttttggcgatgccactggc
atgcgccatctgaaatttgttcaggacaaccactcccggtcggccagaaacgtgctgcgc
ggcctgcattaccagatcgaaaacgcccaaggcaaactggtacgcgtgaccttgggcgaa
gtgctggacatcgcggtggacatccgccgcagttcacccacttttggccgctgggtcggc
gtgcggctgtcggcagagaacttccgccagctgtgggtgccgccgggcttcgctcatggc
ttcgtggtactcagcgactacgccgaattcctgtacaaaaccaccgactactacaccccc
gcagcagaacgctgcatacgctgggacgaccctgacctggcgatcgactgggagcttgag
ggcgtgccccagctctcggccaaggatcagaacggcgtggcattcaaggaggcagacctg
ttcccatga
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