Paucimonas lemoignei: NCTC10937_01024
Help
Entry
NCTC10937_01024 CDS
T05492
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
plg
Paucimonas lemoignei
Pathway
plg02020
Two-component system
plg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10937_01024
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC10937_01024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plg03021
]
NCTC10937_01024
Transcription machinery [BR:
plg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10937_01024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
DUF3164
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
SQF95621
LinkDB
All DBs
Position
1:complement(1149855..1151306)
Genome browser
AA seq
483 aa
AA seq
DB search
MTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNADPLADNIEQKPNPDV
QEPTYQESAPTVDNLEEGDWNERIPNELPVDTAWEDVYQTSASSLPSNDDDEWDFTTRTS
VGESLQSHLLWQLNLAPMSDTDRLIAVTLIDCINNQGYLDETLEEILDAFDPELDIELDE
IEAVLHRIQQFEPAGIGARNLSECLMLQLRQLPAKTRWLAEAQRLVSDFIDLLGSRDYAQ
LMRRMKLKEDELRQVIELVQSLNPRPGSQIESTEAEYVVPDVIVRKDNERWLVELNQESV
PRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETLMKVATQIVEHQRGF
LEYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKFMHTPRGIYELKYFFSSHVSTSEGGE
CSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIAPSSERK
RLM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcagctgcaacaggccatccgcttactccaactgtctacgctggacctccaa
caggagattcaggaggcgctggagtccaatcccatgctggaacgccaggaagaaggcgac
gacttcgacaacgccgacccgctggctgacaacatcgagcaaaagcccaaccctgacgtt
caggaaccgacctaccaggaatccgcgccaactgtggacaacctcgaggaaggcgactgg
aacgagcgcattcccaacgaactgcccgtggatactgcctgggaagacgtttaccagacc
agcgccagcagcctgcccagcaacgatgacgacgagtgggatttcacgacgcgtacatcg
gtgggtgaaagcctgcagagccatttgctgtggcagttgaatctggcaccgatgtccgac
actgatcgcctgatcgcggtgaccttgatcgactgcatcaacaatcagggctacctcgac
gaaaccctcgaagaaattctcgacgcctttgatcccgaactcgatatcgagcttgatgag
atcgaagccgtgctgcaccgcatccaacagtttgaaccagccggcattggcgctcgcaac
ctgagcgaatgcctgatgctgcaattgcgccagctacccgccaagacccgctggctggcc
gaagcgcaacgtctggtcagtgatttcatcgacctgctcggcagccgtgactatgcgcag
ttgatgcggcgcatgaaactcaaggaagacgagctgcgtcaggtcatcgaactggtccaa
agcctcaaccctcgccccggctcgcaaatcgaatccacagaagcggaatacgtggtgccc
gatgtgatcgtgcgcaaggacaacgagcgctggctggtggaactcaatcaggaatccgtg
ccgcgcctgcgggtcaatccgcagtacgcaggcttcgtgcgccgggcagataccagcgcc
gacaacaccttcatgcgcaatcagttacaggaagctcgctggttcatcaagagcctgcag
agccgcaacgaaacattgatgaaggtcgcgacccagatcgtcgagcatcaacgcggcttt
ctcgagtacggcgatgaggcgatgaagccgttggtactgcatgacatcgctgaagcggtc
ggcatgcacgaatcgactatttcgcgcgtcaccacgcaaaaattcatgcataccccgcgc
ggtatttacgagctgaaatatttcttttcaagccacgtaagtacctctgaaggcggtgag
tgttcgtccacagccattcgcgcgatcatcaaaaaactggttgccgcggaaaatcagaaa
aagccgttgagtgacagcaagatcgctggtttactggaggcacaaggcattcaagtagcc
cgccgcacagtcgccaagtaccgcgaatcacttggcatagcgccctccagcgaacgtaag
cgactgatgtga
DBGET
integrated database retrieval system
