Paucimonas lemoignei: NCTC10937_01120
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Entry
NCTC10937_01120 CDS
T05492
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plg
Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:
plg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plg03019
]
NCTC10937_01120 (rnc)
03009 Ribosome biogenesis [BR:
plg03009
]
NCTC10937_01120 (rnc)
03036 Chromosome and associated proteins [BR:
plg03036
]
NCTC10937_01120 (rnc)
Enzymes [BR:
plg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NCTC10937_01120 (rnc)
Messenger RNA biogenesis [BR:
plg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10937_01120 (rnc)
Ribosome biogenesis [BR:
plg03009
]
Eukaryotic type
90S particles
RNase
NCTC10937_01120 (rnc)
Prokaryotic type
rRNA processing factors
NCTC10937_01120 (rnc)
Chromosome and associated proteins [BR:
plg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NCTC10937_01120 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
MmeI_N
Motif
Other DBs
NCBI-ProteinID:
SQF95842
LinkDB
All DBs
Position
1:1245261..1245950
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AA seq
229 aa
AA seq
DB search
MTVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
QAREGQLSRLRARLVKGETLALLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMDMARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRMFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtttccttgagtcgcctggagcgtcagctcggctacaccttcaaagatcaggaa
ctgatggttctggccctgacacaccgcagctttgccggtcgcaataacgagcgcctggaa
ttcctcggtgatgccatcctcaacttcgttgccggtgaagcgctgttcgaccgcttccct
caagcccgtgaaggccagctgtctcgcctgcgggcgcgtttggtcaagggtgagaccctg
gcgttgctggctcgcggttttgacctgggtgattacctgcgtctggggtccggcgaattg
aaaagcggcgggtttcgccgtgagtcgattctggccgatgccctggaagccctgattggc
gccatctatctggacgccgggatggacatggctcgcgagcgcgttttggcctggttgacc
accgagttcgacagcctgacgctggtggacaccaacaaggatccgaaaacccgattgcag
gagtttctgcagtcccgcgcctgtgagctgccgcgatacgaagtggtggatatccagggc
gaaccgcactgccggatgtttttcgtcgagtgcgagatcaccttattgaatgaaaaaagc
cggggtcagggtgtcagtcgtcgcattgccgaacaggtagcagcggccgcagcactcatt
gccctaggcgtggagaacggcaatgactga
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