KEGG   Paucimonas lemoignei: NCTC10937_01379
Entry
NCTC10937_01379   CDS       T05492                                 
Symbol
vapC
Name
(GenBank) VagD family protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
plg  Paucimonas lemoignei
Brite
KEGG Orthology (KO) [BR:plg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plg03016]
    NCTC10937_01379 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plg02048]
    NCTC10937_01379 (vapC)
Transfer RNA biogenesis [BR:plg03016]
 Prokaryotic type
  tRNA degradation factors
   NCTC10937_01379 (vapC)
Prokaryotic defense system [BR:plg02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NCTC10937_01379 (vapC)
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: SQF97040
LinkDB
Position
1:1535707..1536108
AA seq 133 aa
MLDTCICSFIMREHPESVLQRLGAEVARNNRIVISAITYAEMRYGQIGKKASPKHKTLVD
EFVKRLDEVLPWDQNAVDATVEVKSKLTKAGTTIGENDTAIAGHAIASGCTLVTNNVREF
SRVVGLSYEDWVH
NT seq 402 nt   +upstreamnt  +downstreamnt
atgctcgatacctgcatttgctcgttcatcatgcgcgaacatccggagtcggtcttgcag
cgactgggcgcagaagtggcccgaaataatcgcatcgtgatttccgccataacctacgcc
gaaatgcgttacggccagatcggcaagaaggcatcgcccaagcacaagacgctggttgat
gagtttgtaaagcgtctggatgaggtcttgccgtgggatcaaaatgccgtagacgcgaca
gtcgaggtaaagagcaaactcaccaaggcaggcacgactattggtgagaatgacaccgcc
attgctgggcacgccattgcttcgggttgtacgttggtcacgaacaatgttcgtgaattc
agccgagttgtcgggctgtcttacgaagactgggtccactga

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